Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 AP001282.1-201ENST00000531301 1499 ntBASIC12.43□□□□□ -0.42
NKX6-2Q9C056 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 RCN1P1-201ENST00000400413 996 ntBASIC12.43□□□□□ -0.42
NKX6-2Q9C056 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 AC012306.2-201ENST00000609350 630 ntBASIC12.43□□□□□ -0.42
NKX6-2Q9C056 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 MIR497HG-202ENST00000572453 3838 ntBASIC12.43□□□□□ -0.42
NKX6-2Q9C056 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
NKX6-2Q9C056 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 AC022616.7-201ENST00000525383 220 ntBASIC12.42□□□□□ -0.42
NKX6-2Q9C056 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 MIR5100-201ENST00000579544 119 ntBASIC12.42□□□□□ -0.42
NKX6-2Q9C056 GGTLC5P-201ENST00000617623 998 ntBASIC12.42□□□□□ -0.42
NKX6-2Q9C056 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 KRT8P24-201ENST00000560290 1559 ntBASIC12.42□□□□□ -0.42
NKX6-2Q9C056 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NKX6-2Q9C056 AC016734.2-201ENST00000624325 1377 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms