Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM2Q9C040 AJ011931.1-201ENST00000618749 2492 ntBASIC14.12□□□□□ -0.15
TRIM2Q9C040 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 AP000845.1-201ENST00000581677 2131 ntBASIC14.11□□□□□ -0.15
TRIM2Q9C040 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 LINC02560-201ENST00000596379 459 ntBASIC14.11□□□□□ -0.15
TRIM2Q9C040 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 AC008761.3-201ENST00000624803 892 ntBASIC14.11□□□□□ -0.15
TRIM2Q9C040 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM2Q9C040 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 ACE3P-201ENST00000423435 1973 ntBASIC14.11□□□□□ -0.15
TRIM2Q9C040 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM2Q9C040 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 TSSK5P-201ENST00000423978 907 ntBASIC14.1□□□□□ -0.15
TRIM2Q9C040 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 MEIS3P1-201ENST00000495167 958 ntBASIC14.1□□□□□ -0.15
TRIM2Q9C040 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRIM2Q9C040 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM2Q9C040 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM2Q9C040 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms