Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
VGLL1Q99990 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
VGLL1Q99990 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VGLL1Q99990 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.66□□□□□ -0.54
VGLL1Q99990 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VGLL1Q99990 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VGLL1Q99990 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VGLL1Q99990 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.66□□□□□ -0.54
VGLL1Q99990 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
VGLL1Q99990 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC11.66□□□□□ -0.54
VGLL1Q99990 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VGLL1Q99990 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VGLL1Q99990 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
VGLL1Q99990 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VGLL1Q99990 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VGLL1Q99990 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
VGLL1Q99990 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.66□□□□□ -0.54
VGLL1Q99990 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VGLL1Q99990 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.65□□□□□ -0.54
VGLL1Q99990 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC11.65□□□□□ -0.54
VGLL1Q99990 AC067750.1-201ENST00000608826 6545 ntBASIC11.65□□□□□ -0.54
VGLL1Q99990 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
VGLL1Q99990 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.65□□□□□ -0.54
VGLL1Q99990 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.65□□□□□ -0.54
VGLL1Q99990 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.65□□□□□ -0.54
VGLL1Q99990 SPDYE17-201ENST00000412399 783 ntBASIC11.65□□□□□ -0.54
VGLL1Q99990 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.65□□□□□ -0.54
VGLL1Q99990 KRT18P32-201ENST00000424695 1287 ntBASIC11.65□□□□□ -0.54
VGLL1Q99990 GHSR-202ENST00000427970 912 ntBASIC11.65□□□□□ -0.54
VGLL1Q99990 FAM58DP-201ENST00000428076 619 ntBASIC11.65□□□□□ -0.54
VGLL1Q99990 MKNK2P1-201ENST00000437526 628 ntBASIC11.65□□□□□ -0.54
VGLL1Q99990 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.65□□□□□ -0.54
VGLL1Q99990 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.65□□□□□ -0.54
VGLL1Q99990 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.65□□□□□ -0.54
VGLL1Q99990 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
VGLL1Q99990 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.65□□□□□ -0.54
VGLL1Q99990 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
VGLL1Q99990 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC11.65□□□□□ -0.54
VGLL1Q99990 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.65□□□□□ -0.54
VGLL1Q99990 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
VGLL1Q99990 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
VGLL1Q99990 AC022145.2-201ENST00000598203 171 ntBASIC11.65□□□□□ -0.54
VGLL1Q99990 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
VGLL1Q99990 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.65□□□□□ -0.54
VGLL1Q99990 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.65□□□□□ -0.54
VGLL1Q99990 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.65□□□□□ -0.54
VGLL1Q99990 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
VGLL1Q99990 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
VGLL1Q99990 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.65□□□□□ -0.55
VGLL1Q99990 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
VGLL1Q99990 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
VGLL1Q99990 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
VGLL1Q99990 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.65□□□□□ -0.55
VGLL1Q99990 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
VGLL1Q99990 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
VGLL1Q99990 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 MTHFR-210ENST00000641407 2387 ntBASIC11.64□□□□□ -0.55
VGLL1Q99990 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.64□□□□□ -0.55
VGLL1Q99990 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
VGLL1Q99990 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.64□□□□□ -0.55
VGLL1Q99990 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.64□□□□□ -0.55
VGLL1Q99990 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.64□□□□□ -0.55
VGLL1Q99990 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
VGLL1Q99990 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 LINC01230-201ENST00000625222 3017 ntBASIC11.64□□□□□ -0.55
VGLL1Q99990 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.64□□□□□ -0.55
VGLL1Q99990 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms