Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC10.16□□□□□ -0.78
LITAFQ99732 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC10.16□□□□□ -0.78
LITAFQ99732 BCL10-202ENST00000620248 774 ntTSL 5 BASIC10.16□□□□□ -0.78
LITAFQ99732 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
LITAFQ99732 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC10.16□□□□□ -0.78
LITAFQ99732 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
LITAFQ99732 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC10.16□□□□□ -0.78
LITAFQ99732 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC10.16□□□□□ -0.78
LITAFQ99732 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC10.16□□□□□ -0.78
LITAFQ99732 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC10.16□□□□□ -0.78
LITAFQ99732 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
LITAFQ99732 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LITAFQ99732 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
LITAFQ99732 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC10.16□□□□□ -0.78
LITAFQ99732 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
LITAFQ99732 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC10.15□□□□□ -0.78
LITAFQ99732 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
LITAFQ99732 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC10.15□□□□□ -0.78
LITAFQ99732 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC10.15□□□□□ -0.78
LITAFQ99732 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC10.15□□□□□ -0.78
LITAFQ99732 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 AL118506.1-201ENST00000601296 3082 ntBASIC10.15□□□□□ -0.78
LITAFQ99732 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.15□□□□□ -0.78
LITAFQ99732 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.15□□□□□ -0.78
LITAFQ99732 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC10.15□□□□□ -0.78
LITAFQ99732 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC10.15□□□□□ -0.78
LITAFQ99732 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC10.15□□□□□ -0.78
LITAFQ99732 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC10.15□□□□□ -0.78
LITAFQ99732 PENK-208ENST00000523051 772 ntTSL 5 BASIC10.15□□□□□ -0.78
LITAFQ99732 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC10.15□□□□□ -0.78
LITAFQ99732 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC10.15□□□□□ -0.78
LITAFQ99732 OR7E14P-202ENST00000530490 1290 ntBASIC10.15□□□□□ -0.78
LITAFQ99732 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC10.15□□□□□ -0.78
LITAFQ99732 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC10.15□□□□□ -0.78
LITAFQ99732 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC10.15□□□□□ -0.78
LITAFQ99732 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC10.15□□□□□ -0.78
LITAFQ99732 AL138918.1-201ENST00000568306 659 ntBASIC10.15□□□□□ -0.78
LITAFQ99732 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC10.15□□□□□ -0.78
LITAFQ99732 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC10.15□□□□□ -0.78
LITAFQ99732 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC10.15□□□□□ -0.78
LITAFQ99732 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
LITAFQ99732 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC10.15□□□□□ -0.78
LITAFQ99732 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC10.15□□□□□ -0.78
LITAFQ99732 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC10.15□□□□□ -0.78
LITAFQ99732 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
LITAFQ99732 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
LITAFQ99732 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC10.15□□□□□ -0.79
LITAFQ99732 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.79
LITAFQ99732 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
LITAFQ99732 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.79
LITAFQ99732 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
LITAFQ99732 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
LITAFQ99732 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
LITAFQ99732 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
LITAFQ99732 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
LITAFQ99732 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC10.15□□□□□ -0.79
LITAFQ99732 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
LITAFQ99732 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
LITAFQ99732 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
LITAFQ99732 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.79
LITAFQ99732 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
LITAFQ99732 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
LITAFQ99732 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC10.15□□□□□ -0.79
LITAFQ99732 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC10.14□□□□□ -0.79
LITAFQ99732 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC10.14□□□□□ -0.79
LITAFQ99732 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LITAFQ99732 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
LITAFQ99732 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.14□□□□□ -0.79
LITAFQ99732 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
LITAFQ99732 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LITAFQ99732 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC10.14□□□□□ -0.79
LITAFQ99732 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms