Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF2Q99496 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RNF2Q99496 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
RNF2Q99496 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RNF2Q99496 PHKG1P2-201ENST00000457537 863 ntBASIC12.27□□□□□ -0.45
RNF2Q99496 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.27□□□□□ -0.45
RNF2Q99496 AC023141.5-201ENST00000458585 616 ntBASIC12.27□□□□□ -0.45
RNF2Q99496 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RNF2Q99496 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF2Q99496 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.27□□□□□ -0.45
RNF2Q99496 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
RNF2Q99496 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.27□□□□□ -0.45
RNF2Q99496 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.27□□□□□ -0.45
RNF2Q99496 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.27□□□□□ -0.45
RNF2Q99496 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.27□□□□□ -0.45
RNF2Q99496 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
RNF2Q99496 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.27□□□□□ -0.45
RNF2Q99496 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF2Q99496 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF2Q99496 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RNF2Q99496 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF2Q99496 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
RNF2Q99496 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
RNF2Q99496 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.27□□□□□ -0.45
RNF2Q99496 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.27□□□□□ -0.45
RNF2Q99496 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RNF2Q99496 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RNF2Q99496 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
RNF2Q99496 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RNF2Q99496 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.26□□□□□ -0.45
RNF2Q99496 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF2Q99496 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF2Q99496 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RNF2Q99496 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.26□□□□□ -0.45
RNF2Q99496 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF2Q99496 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RNF2Q99496 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF2Q99496 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
RNF2Q99496 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.26□□□□□ -0.45
RNF2Q99496 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
RNF2Q99496 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
RNF2Q99496 RBPMS2P1-201ENST00000437762 623 ntBASIC12.26□□□□□ -0.45
RNF2Q99496 DNAJB3-202ENST00000449667 1266 ntBASIC12.26□□□□□ -0.45
RNF2Q99496 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF2Q99496 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.26□□□□□ -0.45
RNF2Q99496 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.26□□□□□ -0.45
RNF2Q99496 ALG1L8P-201ENST00000533887 760 ntBASIC12.26□□□□□ -0.45
RNF2Q99496 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF2Q99496 RARRES2P9-201ENST00000565168 469 ntBASIC12.26□□□□□ -0.45
RNF2Q99496 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
RNF2Q99496 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF2Q99496 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.26□□□□□ -0.45
RNF2Q99496 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.26□□□□□ -0.45
RNF2Q99496 AL691403.2-201ENST00000618460 490 ntBASIC12.26□□□□□ -0.45
RNF2Q99496 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
RNF2Q99496 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF2Q99496 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
RNF2Q99496 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
RNF2Q99496 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF2Q99496 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
RNF2Q99496 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.26□□□□□ -0.45
RNF2Q99496 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.26□□□□□ -0.45
RNF2Q99496 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
RNF2Q99496 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RNF2Q99496 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RNF2Q99496 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
RNF2Q99496 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF2Q99496 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF2Q99496 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RNF2Q99496 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RNF2Q99496 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms