Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 ATP5G2P4-201ENST00000442175 420 ntBASIC14.78□□□□□ -0.04
LINC00615Q96LM1 AL590640.2-201ENST00000457038 527 ntBASIC14.78□□□□□ -0.04
LINC00615Q96LM1 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 AC008687.7-202ENST00000637404 953 ntBASIC14.78□□□□□ -0.04
LINC00615Q96LM1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LINC00615Q96LM1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.77□□□□□ -0.04
LINC00615Q96LM1 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00615Q96LM1 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 AC138696.2-201ENST00000607376 223 ntBASIC14.77□□□□□ -0.05
LINC00615Q96LM1 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 COX11-210ENST00000639671 696 ntBASIC14.77□□□□□ -0.05
LINC00615Q96LM1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 AJ011931.1-201ENST00000618749 2492 ntBASIC14.77□□□□□ -0.05
LINC00615Q96LM1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00615Q96LM1 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00615Q96LM1 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00615Q96LM1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LINC00615Q96LM1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00615Q96LM1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00615Q96LM1 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00615Q96LM1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00615Q96LM1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00615Q96LM1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00615Q96LM1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00615Q96LM1 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms