Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.46■□□□□ 0.06
CHMP6Q96FZ7 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CHMP6Q96FZ7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.46■□□□□ 0.06
CHMP6Q96FZ7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CHMP6Q96FZ7 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 AC130686.1-201ENST00000622936 2466 ntBASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 AC061975.2-201ENST00000581722 295 ntBASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 AC097359.3-201ENST00000603982 1210 ntBASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CHMP6Q96FZ7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 BCAR1-209ENST00000546196 1340 ntBASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 IGLL3P-201ENST00000412472 434 ntBASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 AL590627.1-203ENST00000421194 1026 ntBASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 AC092474.2-201ENST00000424288 719 ntBASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 RPS8P6-201ENST00000426177 609 ntBASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 HCG4B-203ENST00000450128 991 ntBASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 TPT1P11-201ENST00000458482 498 ntBASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 RPL13AP23-201ENST00000480739 586 ntBASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 AC018845.2-201ENST00000568326 409 ntBASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 AC023141.13-201ENST00000604991 943 ntBASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHMP6Q96FZ7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CHMP6Q96FZ7 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHMP6Q96FZ7 AC005562.1-201ENST00000583030 3219 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms