Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 ACTG1P3-201ENST00000431775 1114 ntBASIC13.41□□□□□ -0.26
TMEM54Q969K7 EIF3FP3-201ENST00000434851 1086 ntBASIC13.41□□□□□ -0.26
TMEM54Q969K7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 RPSAP52-203ENST00000622976 1023 ntBASIC13.41□□□□□ -0.26
TMEM54Q969K7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.41□□□□□ -0.26
TMEM54Q969K7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TMEM54Q969K7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 KRT8P35-201ENST00000483942 1338 ntBASIC13.4□□□□□ -0.26
TMEM54Q969K7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 LRRC59-203ENST00000576448 1531 ntBASIC13.4□□□□□ -0.26
TMEM54Q969K7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 AC023824.1-201ENST00000562945 2975 ntBASIC13.4□□□□□ -0.26
TMEM54Q969K7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 AC018442.1-201ENST00000421439 2061 ntBASIC13.4□□□□□ -0.26
TMEM54Q969K7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 PKD1P5-201ENST00000532415 10291 ntBASIC13.4□□□□□ -0.26
TMEM54Q969K7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 AL390755.1-201ENST00000623716 2027 ntBASIC13.4□□□□□ -0.26
TMEM54Q969K7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 AC023090.2-201ENST00000625182 2110 ntBASIC13.4□□□□□ -0.26
TMEM54Q969K7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TMEM54Q969K7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.4□□□□□ -0.26
TMEM54Q969K7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TMEM54Q969K7 CICP14-201ENST00000629111 2732 ntBASIC13.4□□□□□ -0.27
TMEM54Q969K7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
TMEM54Q969K7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TMEM54Q969K7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.39□□□□□ -0.27
TMEM54Q969K7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TMEM54Q969K7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms