Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHC3Q92529 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SHC3Q92529 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHC3Q92529 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHC3Q92529 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHC3Q92529 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
SHC3Q92529 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHC3Q92529 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SHC3Q92529 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SHC3Q92529 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SHC3Q92529 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SHC3Q92529 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SHC3Q92529 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SHC3Q92529 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SHC3Q92529 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.24■□□□□ 0.19
SHC3Q92529 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.24■□□□□ 0.19
SHC3Q92529 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.24■□□□□ 0.19
SHC3Q92529 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.24■□□□□ 0.19
SHC3Q92529 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SHC3Q92529 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
SHC3Q92529 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SHC3Q92529 KLF2P2-201ENST00000416807 1039 ntBASIC16.24■□□□□ 0.19
SHC3Q92529 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 AC114812.1-204ENST00000449669 728 ntBASIC16.24■□□□□ 0.19
SHC3Q92529 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SHC3Q92529 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.24■□□□□ 0.19
SHC3Q92529 CLUHP6-201ENST00000580789 941 ntBASIC16.24■□□□□ 0.19
SHC3Q92529 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SHC3Q92529 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.24■□□□□ 0.19
SHC3Q92529 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
SHC3Q92529 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SHC3Q92529 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SHC3Q92529 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.24■□□□□ 0.19
SHC3Q92529 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.24■□□□□ 0.19
SHC3Q92529 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHC3Q92529 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SHC3Q92529 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SHC3Q92529 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.23■□□□□ 0.19
SHC3Q92529 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.23■□□□□ 0.19
SHC3Q92529 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.23■□□□□ 0.19
SHC3Q92529 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.23■□□□□ 0.19
SHC3Q92529 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
SHC3Q92529 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHC3Q92529 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHC3Q92529 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.23■□□□□ 0.19
SHC3Q92529 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SHC3Q92529 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SHC3Q92529 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHC3Q92529 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHC3Q92529 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SHC3Q92529 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.23■□□□□ 0.19
SHC3Q92529 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHC3Q92529 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.23■□□□□ 0.19
SHC3Q92529 TERF1P3-201ENST00000505638 1227 ntBASIC16.23■□□□□ 0.19
SHC3Q92529 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.23■□□□□ 0.19
SHC3Q92529 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.23■□□□□ 0.19
SHC3Q92529 TP53TG3HP-202ENST00000569755 579 ntBASIC16.23■□□□□ 0.19
SHC3Q92529 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.23■□□□□ 0.19
SHC3Q92529 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.23■□□□□ 0.19
SHC3Q92529 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.23■□□□□ 0.19
SHC3Q92529 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.23■□□□□ 0.19
SHC3Q92529 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHC3Q92529 AP005019.2-201ENST00000615104 511 ntBASIC16.23■□□□□ 0.19
SHC3Q92529 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.23■□□□□ 0.19
SHC3Q92529 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.23■□□□□ 0.19
SHC3Q92529 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHC3Q92529 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHC3Q92529 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SHC3Q92529 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHC3Q92529 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.23■□□□□ 0.19
SHC3Q92529 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.23■□□□□ 0.19
SHC3Q92529 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SHC3Q92529 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHC3Q92529 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.23■□□□□ 0.19
SHC3Q92529 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHC3Q92529 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHC3Q92529 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHC3Q92529 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHC3Q92529 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SHC3Q92529 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
SHC3Q92529 AC023908.3-201ENST00000564211 3047 ntBASIC16.22■□□□□ 0.19
SHC3Q92529 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC3Q92529 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms