Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 AC022210.1-201ENST00000449856 793 ntBASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 AC025279.2-201ENST00000569730 653 ntBASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 PRSS30P-206ENST00000641773 873 ntBASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 AC092506.1-202ENST00000401022 528 ntBASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 AL355864.2-201ENST00000447420 863 ntBASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 AC106760.1-201ENST00000508690 800 ntBASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 BX539320.1-201ENST00000623759 877 ntBASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SHROOM3Q8TF72 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 KLF2P2-201ENST00000416807 1039 ntBASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 BNIP3P42-201ENST00000454982 569 ntBASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 AC104989.1-201ENST00000519711 778 ntBASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 AP003171.2-201ENST00000528208 925 ntBASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 BNIP3P29-201ENST00000598302 571 ntBASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 AC011447.5-201ENST00000616168 564 ntBASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 FAM45BP-202ENST00000592932 1624 ntBASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 AL390755.1-201ENST00000623716 2027 ntBASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
SHROOM3Q8TF72 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHROOM3Q8TF72 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.49■□□□□ 0.07
SHROOM3Q8TF72 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHROOM3Q8TF72 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SHROOM3Q8TF72 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.49■□□□□ 0.07
SHROOM3Q8TF72 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SHROOM3Q8TF72 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms