Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
XRN1Q8IZH2 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC20.51■□□□□ 0.87
XRN1Q8IZH2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
XRN1Q8IZH2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
XRN1Q8IZH2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
XRN1Q8IZH2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
XRN1Q8IZH2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
XRN1Q8IZH2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.51■□□□□ 0.87
XRN1Q8IZH2 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC20.51■□□□□ 0.87
XRN1Q8IZH2 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
XRN1Q8IZH2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 COX20P1-201ENST00000366529 357 ntBASIC20.5■□□□□ 0.87
XRN1Q8IZH2 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 CD164-210ENST00000512821 964 ntTSL 2 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 RNA5SP417-201ENST00000516459 108 ntBASIC20.5■□□□□ 0.87
XRN1Q8IZH2 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 MROH4P-201ENST00000431302 1578 ntBASIC20.5■□□□□ 0.87
XRN1Q8IZH2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 R3HDM2P2-201ENST00000401880 2116 ntBASIC20.5■□□□□ 0.87
XRN1Q8IZH2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 Z69890.1-201ENST00000382990 339 ntBASIC20.5■□□□□ 0.87
XRN1Q8IZH2 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 RPS23-204ENST00000507980 836 ntTSL 2 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 MIR4472-1-201ENST00000584349 80 ntBASIC20.5■□□□□ 0.87
XRN1Q8IZH2 HKR1-225ENST00000592168 566 ntTSL 4 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC20.5■□□□□ 0.87
XRN1Q8IZH2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 ERP29P1-201ENST00000442902 706 ntBASIC20.49■□□□□ 0.87
XRN1Q8IZH2 AC093909.3-201ENST00000504783 336 ntBASIC20.49■□□□□ 0.87
XRN1Q8IZH2 PGAM1P12-201ENST00000505622 748 ntBASIC20.49■□□□□ 0.87
XRN1Q8IZH2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 KRT8P1-201ENST00000557533 1207 ntBASIC20.49■□□□□ 0.87
XRN1Q8IZH2 EIF5AP2-201ENST00000585668 1047 ntBASIC20.49■□□□□ 0.87
XRN1Q8IZH2 AC011247.3-201ENST00000603297 438 ntBASIC20.49■□□□□ 0.87
XRN1Q8IZH2 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
XRN1Q8IZH2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 AC092580.1-201ENST00000433998 658 ntBASIC20.48■□□□□ 0.87
XRN1Q8IZH2 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 RN7SL665P-201ENST00000578793 300 ntBASIC20.48■□□□□ 0.87
XRN1Q8IZH2 AC012073.1-201ENST00000606114 1108 ntBASIC20.48■□□□□ 0.87
XRN1Q8IZH2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
XRN1Q8IZH2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms