Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.34■□□□□ 0.05
TRIM42Q8IWZ5 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.33■□□□□ 0.05
TRIM42Q8IWZ5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TRIM42Q8IWZ5 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM42Q8IWZ5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM42Q8IWZ5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM42Q8IWZ5 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM42Q8IWZ5 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRIM42Q8IWZ5 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TRIM42Q8IWZ5 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 AC018442.1-201ENST00000421439 2061 ntBASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 UPF3AP3-201ENST00000420996 769 ntBASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 AC010327.4-202ENST00000591484 748 ntBASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 AC099522.2-201ENST00000607001 744 ntBASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 GPALPP1-207ENST00000611650 899 ntBASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 AC006538.3-201ENST00000612495 578 ntBASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 AC092135.3-201ENST00000624151 1846 ntBASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRIM42Q8IWZ5 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 LINC01230-201ENST00000625222 3017 ntBASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 MIR1233-2-201ENST00000408138 82 ntBASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 MIR1233-1-201ENST00000408722 82 ntBASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 MCCD1P2-201ENST00000423228 335 ntBASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 AC112482.1-201ENST00000492080 688 ntBASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 AC015802.1-201ENST00000588104 1449 ntBASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRIM42Q8IWZ5 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM42Q8IWZ5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms