Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX6Q8HWS3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.94■□□□□ 0.14
RFX6Q8HWS3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX6Q8HWS3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX6Q8HWS3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX6Q8HWS3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RFX6Q8HWS3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX6Q8HWS3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.94■□□□□ 0.14
RFX6Q8HWS3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX6Q8HWS3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.94■□□□□ 0.14
RFX6Q8HWS3 FAM45BP-202ENST00000592932 1624 ntBASIC15.94■□□□□ 0.14
RFX6Q8HWS3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RFX6Q8HWS3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 CLK3P2-201ENST00000427566 1453 ntBASIC15.93■□□□□ 0.14
RFX6Q8HWS3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 AC007292.2-201ENST00000593524 1812 ntBASIC15.93■□□□□ 0.14
RFX6Q8HWS3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFX6Q8HWS3 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.92■□□□□ 0.14
RFX6Q8HWS3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 AL390755.1-201ENST00000623716 2027 ntBASIC15.92■□□□□ 0.14
RFX6Q8HWS3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 CICP14-201ENST00000629111 2732 ntBASIC15.92■□□□□ 0.14
RFX6Q8HWS3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 AC093214.1-201ENST00000511688 1107 ntBASIC15.92■□□□□ 0.14
RFX6Q8HWS3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 AC104794.3-201ENST00000566840 1248 ntBASIC15.92■□□□□ 0.14
RFX6Q8HWS3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 AL390955.2-201ENST00000603032 514 ntBASIC15.92■□□□□ 0.14
RFX6Q8HWS3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX6Q8HWS3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms