Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 AL359258.3-201ENST00000622910 2331 ntBASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM4Q86VH4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 AC068418.2-201ENST00000577309 3703 ntBASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 EIF3FP3-201ENST00000434851 1086 ntBASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 RPL7P3-201ENST00000441388 714 ntBASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 SNX29P1-201ENST00000548357 1007 ntBASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 AC133552.6-201ENST00000613406 534 ntBASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 MIR6775-201ENST00000617557 69 ntBASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 AC132938.4-201ENST00000623835 848 ntBASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 DBET-201ENST00000630918 3363 ntBASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.96□□□□□ -0.01
LRRTM4Q86VH4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRRTM4Q86VH4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.96□□□□□ -0.02
LRRTM4Q86VH4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.96□□□□□ -0.02
LRRTM4Q86VH4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
LRRTM4Q86VH4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRRTM4Q86VH4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.96□□□□□ -0.02
LRRTM4Q86VH4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRRTM4Q86VH4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 AP000845.1-201ENST00000581677 2131 ntBASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 AP000812.2-201ENST00000538934 718 ntBASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 RN7SL48P-201ENST00000579283 293 ntBASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM4Q86VH4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms