Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 PKD1P5-201ENST00000532415 10291 ntBASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXR1Q6PIV2 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 MTHFR-210ENST00000641407 2387 ntBASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 AL365209.1-201ENST00000624418 6473 ntBASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXR1Q6PIV2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 ST20-AS1-201ENST00000560255 4223 ntBASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 FAM207CP-201ENST00000443486 507 ntBASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 AC027369.6-201ENST00000525520 931 ntBASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 AP000842.3-202ENST00000569238 1080 ntBASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 AC003101.2-201ENST00000612557 442 ntBASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXR1Q6PIV2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXR1Q6PIV2 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.02■□□□□ 0.15
FOXR1Q6PIV2 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FOXR1Q6PIV2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
FOXR1Q6PIV2 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
FOXR1Q6PIV2 AC011474.4-201ENST00000623523 2076 ntBASIC16.02■□□□□ 0.15
FOXR1Q6PIV2 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXR1Q6PIV2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.02■□□□□ 0.15
FOXR1Q6PIV2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.02■□□□□ 0.15
FOXR1Q6PIV2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXR1Q6PIV2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FOXR1Q6PIV2 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC16.02■□□□□ 0.15
FOXR1Q6PIV2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.02■□□□□ 0.15
FOXR1Q6PIV2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms