Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 AC018442.1-201ENST00000421439 2061 ntBASIC11.6□□□□□ -0.55
MRPL54Q6P161 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 AC087499.1-201ENST00000418141 1075 ntBASIC11.6□□□□□ -0.55
MRPL54Q6P161 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 AP006294.2-201ENST00000641667 209 ntBASIC11.6□□□□□ -0.55
MRPL54Q6P161 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.6□□□□□ -0.55
MRPL54Q6P161 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
MRPL54Q6P161 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 CSPG4P11-201ENST00000560634 4910 ntBASIC11.59□□□□□ -0.55
MRPL54Q6P161 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 DRAXINP1-201ENST00000437611 948 ntBASIC11.59□□□□□ -0.55
MRPL54Q6P161 KRT18P57-201ENST00000443599 1254 ntBASIC11.59□□□□□ -0.55
MRPL54Q6P161 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 KRT18P34-201ENST00000488218 1270 ntBASIC11.59□□□□□ -0.55
MRPL54Q6P161 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 TK2-213ENST00000563369 882 ntTSL 5 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 MIR3909-201ENST00000579518 119 ntBASIC11.59□□□□□ -0.55
MRPL54Q6P161 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 MIR4515-201ENST00000584082 81 ntBASIC11.59□□□□□ -0.55
MRPL54Q6P161 AC011467.4-201ENST00000594891 528 ntBASIC11.59□□□□□ -0.55
MRPL54Q6P161 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 AC069148.1-201ENST00000608741 768 ntBASIC11.59□□□□□ -0.55
MRPL54Q6P161 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.59□□□□□ -0.55
MRPL54Q6P161 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
MRPL54Q6P161 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms