Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 AC190387.1-201ENST00000551683 408 ntBASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PRAMEF9Q5VWM5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 FAM45BP-202ENST00000592932 1624 ntBASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 RNU1-114P-201ENST00000365297 166 ntBASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 AL645937.2-201ENST00000396808 931 ntBASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 CLUHP6-201ENST00000580789 941 ntBASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 WFDC1-204ENST00000613603 549 ntBASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PRAMEF9Q5VWM5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms