Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 RPS8P6-201ENST00000426177 609 ntBASIC12.22□□□□□ -0.45
FAM78BQ5VT40 KRT18P3-201ENST00000451602 1288 ntBASIC12.22□□□□□ -0.45
FAM78BQ5VT40 AC074386.1-202ENST00000463561 864 ntBASIC12.22□□□□□ -0.45
FAM78BQ5VT40 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 AL136982.4-201ENST00000437689 1740 ntBASIC12.22□□□□□ -0.45
FAM78BQ5VT40 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
FAM78BQ5VT40 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 HSPA7-201ENST00000445535 1927 ntBASIC12.21□□□□□ -0.45
FAM78BQ5VT40 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 RPL5P21-201ENST00000404620 815 ntBASIC12.21□□□□□ -0.45
FAM78BQ5VT40 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 AC105233.2-201ENST00000523697 349 ntBASIC12.21□□□□□ -0.45
FAM78BQ5VT40 AF228730.5-201ENST00000530288 346 ntBASIC12.21□□□□□ -0.45
FAM78BQ5VT40 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 PDPK2P-202ENST00000562415 1191 ntBASIC12.21□□□□□ -0.45
FAM78BQ5VT40 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 AC073389.1-201ENST00000595595 795 ntBASIC12.21□□□□□ -0.45
FAM78BQ5VT40 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.21□□□□□ -0.45
FAM78BQ5VT40 AC068137.2-201ENST00000605408 478 ntBASIC12.21□□□□□ -0.45
FAM78BQ5VT40 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms