Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 AC079776.1-201ENST00000401540 1152 ntBASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 RPL37AP1-201ENST00000412502 279 ntBASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 AC234783.1-201ENST00000441761 496 ntBASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 TTTY23B-201ENST00000442790 549 ntBASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 AC022210.1-201ENST00000449856 793 ntBASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 DOC2GP-202ENST00000514950 1163 ntBASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 FAM8A2P-201ENST00000528813 1142 ntBASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 RN7SL828P-201ENST00000607615 303 ntBASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 AC004840.1-201ENST00000636359 365 ntBASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHRFAM7AQ494W8 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 AC091951.1-201ENST00000512854 2465 ntBASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 SPDYE19P-201ENST00000338590 713 ntBASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 PRYP6-201ENST00000514804 343 ntBASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 AC007431.3-201ENST00000623221 587 ntBASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.47□□□□□ -0.25
CHRFAM7AQ494W8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms