Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 KRT18P56-201ENST00000507275 550 ntBASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 AC021087.4-201ENST00000563761 564 ntBASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 AC004241.5-201ENST00000623870 2448 ntBASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
ERCC6LQ2NKX8 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 AL118506.1-201ENST00000601296 3082 ntBASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 USP31-203ENST00000567975 2142 ntTSL 2 BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 CLEC4GP1-201ENST00000596555 870 ntBASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 AC004790.2-201ENST00000623588 572 ntBASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 FAM90A12P-201ENST00000519497 2375 ntBASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 FAM90A24P-201ENST00000520792 2369 ntBASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ERCC6LQ2NKX8 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 C2-206ENST00000442278 2434 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 TSPY19P-201ENST00000418461 509 ntBASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 TSPY18P-201ENST00000441642 509 ntBASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.22■□□□□ 0.19
ERCC6LQ2NKX8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms