Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 AC099063.4-201ENST00000641099 1602 ntBASIC14.41□□□□□ -0.1
TNFRSF17Q02223 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF17Q02223 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 AC098614.1-201ENST00000368528 745 ntBASIC14.4□□□□□ -0.1
TNFRSF17Q02223 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 AL139094.1-201ENST00000405549 1188 ntBASIC14.4□□□□□ -0.1
TNFRSF17Q02223 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 AP001063.1-201ENST00000568332 529 ntBASIC14.4□□□□□ -0.1
TNFRSF17Q02223 CLUHP6-201ENST00000580789 941 ntBASIC14.4□□□□□ -0.1
TNFRSF17Q02223 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 REXO1L5P-201ENST00000622260 2098 ntBASIC14.4□□□□□ -0.1
TNFRSF17Q02223 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 KRT8P14-201ENST00000414254 1442 ntBASIC14.4□□□□□ -0.1
TNFRSF17Q02223 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TNFRSF17Q02223 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.39□□□□□ -0.11
TNFRSF17Q02223 AP005019.2-201ENST00000615104 511 ntBASIC14.39□□□□□ -0.11
TNFRSF17Q02223 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms