Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3AP84243 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3AP84243 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3AP84243 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3AP84243 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.67□□□□□ -0.22
H3F3AP84243 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.67□□□□□ -0.22
H3F3AP84243 AL359258.3-201ENST00000622910 2331 ntBASIC13.67□□□□□ -0.22
H3F3AP84243 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3AP84243 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.67□□□□□ -0.22
H3F3AP84243 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3AP84243 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
H3F3AP84243 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.66□□□□□ -0.22
H3F3AP84243 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.66□□□□□ -0.22
H3F3AP84243 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.66□□□□□ -0.22
H3F3AP84243 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
H3F3AP84243 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
H3F3AP84243 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.66□□□□□ -0.22
H3F3AP84243 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
H3F3AP84243 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.66□□□□□ -0.22
H3F3AP84243 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
H3F3AP84243 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
H3F3AP84243 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.66□□□□□ -0.22
H3F3AP84243 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
H3F3AP84243 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.66□□□□□ -0.22
H3F3AP84243 AC093433.1-201ENST00000458048 571 ntBASIC13.66□□□□□ -0.22
H3F3AP84243 AC022137.2-201ENST00000503482 481 ntBASIC13.66□□□□□ -0.22
H3F3AP84243 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.66□□□□□ -0.22
H3F3AP84243 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.66□□□□□ -0.22
H3F3AP84243 AC009486.1-201ENST00000569860 813 ntBASIC13.66□□□□□ -0.22
H3F3AP84243 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.66□□□□□ -0.22
H3F3AP84243 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.66□□□□□ -0.22
H3F3AP84243 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.66□□□□□ -0.22
H3F3AP84243 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
H3F3AP84243 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.66□□□□□ -0.22
H3F3AP84243 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
H3F3AP84243 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.66□□□□□ -0.22
H3F3AP84243 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.66□□□□□ -0.22
H3F3AP84243 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
H3F3AP84243 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.66□□□□□ -0.22
H3F3AP84243 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
H3F3AP84243 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
H3F3AP84243 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H3F3AP84243 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.65□□□□□ -0.22
H3F3AP84243 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.65□□□□□ -0.22
H3F3AP84243 AL157414.3-201ENST00000624276 1954 ntBASIC13.65□□□□□ -0.22
H3F3AP84243 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.65□□□□□ -0.22
H3F3AP84243 KRT8P14-201ENST00000414254 1442 ntBASIC13.65□□□□□ -0.22
H3F3AP84243 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
H3F3AP84243 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
H3F3AP84243 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 DBET-201ENST00000630918 3363 ntBASIC13.65□□□□□ -0.22
H3F3AP84243 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
H3F3AP84243 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
H3F3AP84243 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.65□□□□□ -0.22
H3F3AP84243 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
H3F3AP84243 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
H3F3AP84243 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.65□□□□□ -0.22
H3F3AP84243 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
H3F3AP84243 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.65□□□□□ -0.22
H3F3AP84243 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.65□□□□□ -0.22
H3F3AP84243 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.65□□□□□ -0.22
H3F3AP84243 COX5BP8-201ENST00000416911 349 ntBASIC13.65□□□□□ -0.22
H3F3AP84243 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
H3F3AP84243 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
H3F3AP84243 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms