Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.83■□□□□ 0.44
IRX3P78415 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IRX3P78415 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX3P78415 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IRX3P78415 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IRX3P78415 AC148477.4-201ENST00000613430 1793 ntBASIC17.83■□□□□ 0.44
IRX3P78415 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IRX3P78415 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.83■□□□□ 0.44
IRX3P78415 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.83■□□□□ 0.44
IRX3P78415 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 AC138028.6-201ENST00000616106 1482 ntBASIC17.82■□□□□ 0.44
IRX3P78415 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.82■□□□□ 0.44
IRX3P78415 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
IRX3P78415 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.82■□□□□ 0.44
IRX3P78415 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
IRX3P78415 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.82■□□□□ 0.44
IRX3P78415 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.82■□□□□ 0.44
IRX3P78415 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.82■□□□□ 0.44
IRX3P78415 CNN2P10-201ENST00000443067 918 ntBASIC17.82■□□□□ 0.44
IRX3P78415 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.82■□□□□ 0.44
IRX3P78415 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.82■□□□□ 0.44
IRX3P78415 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 ACTG1P17-201ENST00000558391 1119 ntBASIC17.82■□□□□ 0.44
IRX3P78415 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.82■□□□□ 0.44
IRX3P78415 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.82■□□□□ 0.44
IRX3P78415 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.82■□□□□ 0.44
IRX3P78415 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.82■□□□□ 0.44
IRX3P78415 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
IRX3P78415 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
IRX3P78415 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.82■□□□□ 0.44
IRX3P78415 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.82■□□□□ 0.44
IRX3P78415 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IRX3P78415 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.81■□□□□ 0.44
IRX3P78415 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
IRX3P78415 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
IRX3P78415 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.81■□□□□ 0.44
IRX3P78415 AC092364.2-201ENST00000596710 2692 ntBASIC17.81■□□□□ 0.44
IRX3P78415 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.81■□□□□ 0.44
IRX3P78415 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
IRX3P78415 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
IRX3P78415 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
IRX3P78415 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
IRX3P78415 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.81■□□□□ 0.44
IRX3P78415 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 AC092506.1-202ENST00000401022 528 ntBASIC17.81■□□□□ 0.44
IRX3P78415 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
IRX3P78415 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.81■□□□□ 0.44
IRX3P78415 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.81■□□□□ 0.44
IRX3P78415 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.81■□□□□ 0.44
IRX3P78415 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.81■□□□□ 0.44
IRX3P78415 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
IRX3P78415 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.81■□□□□ 0.44
IRX3P78415 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.81■□□□□ 0.44
IRX3P78415 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
IRX3P78415 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.81■□□□□ 0.44
IRX3P78415 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
IRX3P78415 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IRX3P78415 PCDHA14-201ENST00000506751 2298 ntBASIC17.81■□□□□ 0.44
IRX3P78415 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IRX3P78415 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms