Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.21■□□□□ 0.35
CCNA1P78396 AC008825.2-201ENST00000603374 718 ntBASIC17.21■□□□□ 0.35
CCNA1P78396 AL353770.1-201ENST00000614915 403 ntBASIC17.21■□□□□ 0.35
CCNA1P78396 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.21■□□□□ 0.35
CCNA1P78396 NAP1L6-202ENST00000641404 1222 ntBASIC17.21■□□□□ 0.35
CCNA1P78396 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.21■□□□□ 0.35
CCNA1P78396 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.21■□□□□ 0.35
CCNA1P78396 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CCNA1P78396 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CCNA1P78396 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCNA1P78396 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCNA1P78396 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCNA1P78396 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCNA1P78396 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.2■□□□□ 0.34
CCNA1P78396 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCNA1P78396 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.2■□□□□ 0.34
CCNA1P78396 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCNA1P78396 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCNA1P78396 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCNA1P78396 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.2■□□□□ 0.34
CCNA1P78396 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCNA1P78396 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.2■□□□□ 0.34
CCNA1P78396 AC253536.4-201ENST00000440539 267 ntBASIC17.2■□□□□ 0.34
CCNA1P78396 AC012441.2-201ENST00000444843 739 ntBASIC17.2■□□□□ 0.34
CCNA1P78396 RPL18P13-201ENST00000478088 569 ntBASIC17.2■□□□□ 0.34
CCNA1P78396 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.2■□□□□ 0.34
CCNA1P78396 AC090857.1-201ENST00000527400 390 ntBASIC17.2■□□□□ 0.34
CCNA1P78396 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.2■□□□□ 0.34
CCNA1P78396 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.2■□□□□ 0.34
CCNA1P78396 MIR4783-201ENST00000580343 82 ntBASIC17.2■□□□□ 0.34
CCNA1P78396 AL133499.1-201ENST00000596207 608 ntBASIC17.2■□□□□ 0.34
CCNA1P78396 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.2■□□□□ 0.34
CCNA1P78396 AL132994.2-201ENST00000603120 687 ntBASIC17.2■□□□□ 0.34
CCNA1P78396 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCNA1P78396 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCNA1P78396 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 AL137783.1-201ENST00000623494 1896 ntBASIC17.2■□□□□ 0.34
CCNA1P78396 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.2■□□□□ 0.34
CCNA1P78396 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCNA1P78396 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.2■□□□□ 0.34
CCNA1P78396 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CCNA1P78396 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.19■□□□□ 0.34
CCNA1P78396 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 MST1L-201ENST00000442552 2185 ntBASIC17.19■□□□□ 0.34
CCNA1P78396 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 AC012508.2-201ENST00000567613 1472 ntBASIC17.19■□□□□ 0.34
CCNA1P78396 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CCNA1P78396 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CCNA1P78396 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCNA1P78396 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.19■□□□□ 0.34
CCNA1P78396 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CCNA1P78396 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.19■□□□□ 0.34
CCNA1P78396 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.19■□□□□ 0.34
CCNA1P78396 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.19■□□□□ 0.34
CCNA1P78396 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 SNORD3B-2-202ENST00000571722 791 ntBASIC17.19■□□□□ 0.34
CCNA1P78396 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.19■□□□□ 0.34
CCNA1P78396 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.19■□□□□ 0.34
CCNA1P78396 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCNA1P78396 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.19■□□□□ 0.34
CCNA1P78396 AP000346.4-201ENST00000614827 381 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms