Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 IGHV3-22-201ENST00000520721 359 ntBASIC12.51□□□□□ -0.41
RAB11AP62491 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB11AP62491 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB11AP62491 AC018845.2-201ENST00000568326 409 ntBASIC12.51□□□□□ -0.41
RAB11AP62491 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
RAB11AP62491 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 AC064836.3-201ENST00000607928 673 ntBASIC12.51□□□□□ -0.41
RAB11AP62491 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
RAB11AP62491 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
RAB11AP62491 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RAB11AP62491 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB11AP62491 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB11AP62491 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB11AP62491 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB11AP62491 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB11AP62491 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB11AP62491 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.51□□□□□ -0.41
RAB11AP62491 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
RAB11AP62491 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
RAB11AP62491 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB11AP62491 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB11AP62491 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB11AP62491 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB11AP62491 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB11AP62491 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RAB11AP62491 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 HLA-H-201ENST00000383620 1096 ntBASIC12.5□□□□□ -0.41
RAB11AP62491 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB11AP62491 AC079781.3-201ENST00000449110 356 ntBASIC12.5□□□□□ -0.41
RAB11AP62491 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB11AP62491 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB11AP62491 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 FAM86C2P-203ENST00000528684 1004 ntBASIC12.5□□□□□ -0.41
RAB11AP62491 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB11AP62491 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB11AP62491 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.5□□□□□ -0.41
RAB11AP62491 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB11AP62491 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
RAB11AP62491 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB11AP62491 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB11AP62491 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB11AP62491 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB11AP62491 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB11AP62491 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms