Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SPCS3P61009 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.53□□□□□ -0.4
SPCS3P61009 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.53□□□□□ -0.4
SPCS3P61009 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SPCS3P61009 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SPCS3P61009 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.53□□□□□ -0.4
SPCS3P61009 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SPCS3P61009 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPCS3P61009 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
SPCS3P61009 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.52□□□□□ -0.4
SPCS3P61009 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPCS3P61009 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPCS3P61009 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPCS3P61009 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.52□□□□□ -0.4
SPCS3P61009 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.4
SPCS3P61009 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
SPCS3P61009 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPCS3P61009 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
SPCS3P61009 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPCS3P61009 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPCS3P61009 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SPCS3P61009 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.52□□□□□ -0.41
SPCS3P61009 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 FO393414.2-201ENST00000405153 598 ntBASIC12.52□□□□□ -0.41
SPCS3P61009 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.52□□□□□ -0.41
SPCS3P61009 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 MED15P5-201ENST00000423150 992 ntBASIC12.52□□□□□ -0.41
SPCS3P61009 ADH5P3-201ENST00000433842 1137 ntBASIC12.52□□□□□ -0.41
SPCS3P61009 TPM4P1-201ENST00000436100 807 ntBASIC12.52□□□□□ -0.41
SPCS3P61009 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SPCS3P61009 KRT18P3-201ENST00000451602 1288 ntBASIC12.52□□□□□ -0.41
SPCS3P61009 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.52□□□□□ -0.41
SPCS3P61009 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.52□□□□□ -0.41
SPCS3P61009 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.52□□□□□ -0.41
SPCS3P61009 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 FAM197Y3-203ENST00000618346 717 ntBASIC12.52□□□□□ -0.41
SPCS3P61009 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.52□□□□□ -0.41
SPCS3P61009 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
SPCS3P61009 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.52□□□□□ -0.41
SPCS3P61009 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.52□□□□□ -0.41
SPCS3P61009 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SPCS3P61009 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 UXT-AS1-201ENST00000590504 1525 ntBASIC12.52□□□□□ -0.41
SPCS3P61009 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.52□□□□□ -0.41
SPCS3P61009 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SPCS3P61009 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.51□□□□□ -0.41
SPCS3P61009 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SPCS3P61009 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SPCS3P61009 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SPCS3P61009 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.51□□□□□ -0.41
SPCS3P61009 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.51□□□□□ -0.41
SPCS3P61009 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 DNM1P41-201ENST00000623634 3350 ntBASIC12.51□□□□□ -0.41
SPCS3P61009 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SPCS3P61009 ACE3P-201ENST00000423435 1973 ntBASIC12.51□□□□□ -0.41
SPCS3P61009 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
SPCS3P61009 CICP11-201ENST00000434745 2827 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms