Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.6■□□□□ 0.57
PDE1AP54750 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.6■□□□□ 0.57
PDE1AP54750 RPSAP52-203ENST00000622976 1023 ntBASIC18.6■□□□□ 0.57
PDE1AP54750 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDE1AP54750 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.6■□□□□ 0.57
PDE1AP54750 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.6■□□□□ 0.57
PDE1AP54750 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.6■□□□□ 0.57
PDE1AP54750 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.6■□□□□ 0.57
PDE1AP54750 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDE1AP54750 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE1AP54750 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.6■□□□□ 0.57
PDE1AP54750 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.59■□□□□ 0.57
PDE1AP54750 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.59■□□□□ 0.57
PDE1AP54750 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.59■□□□□ 0.57
PDE1AP54750 AC023908.3-201ENST00000564211 3047 ntBASIC18.59■□□□□ 0.57
PDE1AP54750 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.59■□□□□ 0.57
PDE1AP54750 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.59■□□□□ 0.57
PDE1AP54750 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PDE1AP54750 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.59■□□□□ 0.57
PDE1AP54750 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PDE1AP54750 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.59■□□□□ 0.57
PDE1AP54750 EIF3FP3-201ENST00000434851 1086 ntBASIC18.59■□□□□ 0.57
PDE1AP54750 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.59■□□□□ 0.57
PDE1AP54750 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.59■□□□□ 0.57
PDE1AP54750 AC114812.1-204ENST00000449669 728 ntBASIC18.59■□□□□ 0.57
PDE1AP54750 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.59■□□□□ 0.57
PDE1AP54750 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.59■□□□□ 0.57
PDE1AP54750 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.59■□□□□ 0.57
PDE1AP54750 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.59■□□□□ 0.57
PDE1AP54750 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PDE1AP54750 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PDE1AP54750 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PDE1AP54750 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC18.59■□□□□ 0.57
PDE1AP54750 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.59■□□□□ 0.57
PDE1AP54750 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.59■□□□□ 0.57
PDE1AP54750 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.59■□□□□ 0.57
PDE1AP54750 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PDE1AP54750 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDE1AP54750 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.58■□□□□ 0.57
PDE1AP54750 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
PDE1AP54750 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDE1AP54750 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDE1AP54750 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
PDE1AP54750 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PDE1AP54750 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PDE1AP54750 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDE1AP54750 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.58■□□□□ 0.57
PDE1AP54750 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDE1AP54750 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDE1AP54750 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.58■□□□□ 0.56
PDE1AP54750 ACKR1-201ENST00000368121 1240 ntBASIC18.58■□□□□ 0.56
PDE1AP54750 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.58■□□□□ 0.56
PDE1AP54750 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PDE1AP54750 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PDE1AP54750 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDE1AP54750 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.58■□□□□ 0.56
PDE1AP54750 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.58■□□□□ 0.56
PDE1AP54750 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDE1AP54750 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.58■□□□□ 0.56
PDE1AP54750 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDE1AP54750 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.58■□□□□ 0.56
PDE1AP54750 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.58■□□□□ 0.56
PDE1AP54750 AP005019.2-201ENST00000615104 511 ntBASIC18.58■□□□□ 0.56
PDE1AP54750 CU634019.7-201ENST00000624153 1185 ntBASIC18.58■□□□□ 0.56
PDE1AP54750 FP236241.2-201ENST00000624906 1185 ntBASIC18.58■□□□□ 0.56
PDE1AP54750 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PDE1AP54750 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDE1AP54750 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PDE1AP54750 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDE1AP54750 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDE1AP54750 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDE1AP54750 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.58■□□□□ 0.56
PDE1AP54750 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.58■□□□□ 0.56
PDE1AP54750 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PDE1AP54750 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.57■□□□□ 0.56
PDE1AP54750 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDE1AP54750 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.57■□□□□ 0.56
PDE1AP54750 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms