Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNA3P52797 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
EFNA3P52797 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
EFNA3P52797 NUS1P3-201ENST00000423502 862 ntBASIC14.27□□□□□ -0.13
EFNA3P52797 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.27□□□□□ -0.13
EFNA3P52797 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNA3P52797 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
EFNA3P52797 FO681548.1-201ENST00000455617 1132 ntBASIC14.27□□□□□ -0.13
EFNA3P52797 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.27□□□□□ -0.13
EFNA3P52797 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.27□□□□□ -0.13
EFNA3P52797 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.27□□□□□ -0.13
EFNA3P52797 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.27□□□□□ -0.13
EFNA3P52797 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
EFNA3P52797 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNA3P52797 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.27□□□□□ -0.13
EFNA3P52797 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.27□□□□□ -0.13
EFNA3P52797 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.27□□□□□ -0.13
EFNA3P52797 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNA3P52797 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNA3P52797 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.27□□□□□ -0.13
EFNA3P52797 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
EFNA3P52797 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNA3P52797 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNA3P52797 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
EFNA3P52797 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNA3P52797 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNA3P52797 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EFNA3P52797 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
EFNA3P52797 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
EFNA3P52797 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
EFNA3P52797 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 REXO1L6P-201ENST00000603433 1515 ntBASIC14.26□□□□□ -0.13
EFNA3P52797 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
EFNA3P52797 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
EFNA3P52797 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
EFNA3P52797 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
EFNA3P52797 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
EFNA3P52797 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
EFNA3P52797 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
EFNA3P52797 C2orf27AP3-201ENST00000434123 579 ntBASIC14.26□□□□□ -0.13
EFNA3P52797 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.26□□□□□ -0.13
EFNA3P52797 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.26□□□□□ -0.13
EFNA3P52797 AP003171.2-201ENST00000528208 925 ntBASIC14.26□□□□□ -0.13
EFNA3P52797 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.26□□□□□ -0.13
EFNA3P52797 DUX4L47-201ENST00000566374 394 ntBASIC14.26□□□□□ -0.13
EFNA3P52797 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.26□□□□□ -0.13
EFNA3P52797 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.26□□□□□ -0.13
EFNA3P52797 AL354718.3-201ENST00000616414 581 ntBASIC14.26□□□□□ -0.13
EFNA3P52797 AC138951.2-201ENST00000623455 1161 ntBASIC14.26□□□□□ -0.13
EFNA3P52797 CR382287.1-201ENST00000623954 586 ntBASIC14.26□□□□□ -0.13
EFNA3P52797 RHOXF1P1-202ENST00000635473 501 ntBASIC14.26□□□□□ -0.13
EFNA3P52797 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.26□□□□□ -0.13
EFNA3P52797 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.26□□□□□ -0.13
EFNA3P52797 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 AL162727.3-201ENST00000635661 2787 ntBASIC14.26□□□□□ -0.13
EFNA3P52797 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
EFNA3P52797 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNA3P52797 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNA3P52797 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms