Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SLC9A3P48764 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
SLC9A3P48764 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SLC9A3P48764 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SLC9A3P48764 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SLC9A3P48764 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SLC9A3P48764 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC9A3P48764 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SLC9A3P48764 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC9A3P48764 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 RPSAP43-201ENST00000402237 625 ntBASIC14.1□□□□□ -0.15
SLC9A3P48764 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC9A3P48764 AC211486.1-202ENST00000416371 468 ntBASIC14.1□□□□□ -0.15
SLC9A3P48764 UPF3AP3-201ENST00000420996 769 ntBASIC14.1□□□□□ -0.15
SLC9A3P48764 BX842568.4-201ENST00000421222 227 ntBASIC14.1□□□□□ -0.15
SLC9A3P48764 GHSR-202ENST00000427970 912 ntBASIC14.1□□□□□ -0.15
SLC9A3P48764 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC9A3P48764 AC112482.1-201ENST00000492080 688 ntBASIC14.1□□□□□ -0.15
SLC9A3P48764 AC211476.1-201ENST00000503899 468 ntBASIC14.1□□□□□ -0.15
SLC9A3P48764 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC9A3P48764 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC9A3P48764 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
SLC9A3P48764 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
SLC9A3P48764 AC015910.1-201ENST00000579400 975 ntBASIC14.1□□□□□ -0.15
SLC9A3P48764 AC011467.4-201ENST00000594891 528 ntBASIC14.1□□□□□ -0.15
SLC9A3P48764 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC9A3P48764 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC9A3P48764 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.09□□□□□ -0.15
SLC9A3P48764 AC140479.7-201ENST00000636301 2332 ntBASIC14.09□□□□□ -0.15
SLC9A3P48764 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC9A3P48764 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC9A3P48764 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC9A3P48764 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
SLC9A3P48764 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC9A3P48764 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC9A3P48764 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SLC9A3P48764 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC9A3P48764 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 AL133267.1-201ENST00000398220 340 ntBASIC14.09□□□□□ -0.15
SLC9A3P48764 AC254562.1-201ENST00000417586 456 ntBASIC14.09□□□□□ -0.15
SLC9A3P48764 FAM8A3P-201ENST00000427218 844 ntBASIC14.09□□□□□ -0.15
SLC9A3P48764 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SLC9A3P48764 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.09□□□□□ -0.15
SLC9A3P48764 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SLC9A3P48764 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC9A3P48764 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC9A3P48764 AC010327.5-201ENST00000586923 3061 ntBASIC14.09□□□□□ -0.15
SLC9A3P48764 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC9A3P48764 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC9A3P48764 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC9A3P48764 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SLC9A3P48764 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
SLC9A3P48764 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SLC9A3P48764 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC9A3P48764 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC9A3P48764 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC9A3P48764 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.08□□□□□ -0.15
SLC9A3P48764 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC9A3P48764 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms