Protein–RNA interactions for Protein: P42677

RPS27, 40S ribosomal protein S27, humanhuman

Known RBP Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27P42677 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS27P42677 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.62□□□□□ -0.23
RPS27P42677 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS27P42677 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RPS27P42677 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.62□□□□□ -0.23
RPS27P42677 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.62□□□□□ -0.23
RPS27P42677 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS27P42677 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS27P42677 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS27P42677 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RPS27P42677 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.62□□□□□ -0.23
RPS27P42677 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.62□□□□□ -0.23
RPS27P42677 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.62□□□□□ -0.23
RPS27P42677 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS27P42677 AC140878.1-201ENST00000565277 250 ntBASIC13.62□□□□□ -0.23
RPS27P42677 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.62□□□□□ -0.23
RPS27P42677 AL844908.2-201ENST00000609461 460 ntBASIC13.62□□□□□ -0.23
RPS27P42677 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.62□□□□□ -0.23
RPS27P42677 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS27P42677 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS27P42677 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.62□□□□□ -0.23
RPS27P42677 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.62□□□□□ -0.23
RPS27P42677 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
RPS27P42677 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RPS27P42677 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS27P42677 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS27P42677 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS27P42677 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPS27P42677 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.61□□□□□ -0.23
RPS27P42677 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RPS27P42677 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
RPS27P42677 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.61□□□□□ -0.23
RPS27P42677 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RPS27P42677 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.61□□□□□ -0.23
RPS27P42677 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.61□□□□□ -0.23
RPS27P42677 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.61□□□□□ -0.23
RPS27P42677 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.61□□□□□ -0.23
RPS27P42677 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RPS27P42677 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.61□□□□□ -0.23
RPS27P42677 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.61□□□□□ -0.23
RPS27P42677 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.61□□□□□ -0.23
RPS27P42677 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.61□□□□□ -0.23
RPS27P42677 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.61□□□□□ -0.23
RPS27P42677 AC097493.3-201ENST00000509725 367 ntBASIC13.61□□□□□ -0.23
RPS27P42677 SDHAP3-202ENST00000515467 728 ntBASIC13.61□□□□□ -0.23
RPS27P42677 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.61□□□□□ -0.23
RPS27P42677 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.61□□□□□ -0.23
RPS27P42677 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.61□□□□□ -0.23
RPS27P42677 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.61□□□□□ -0.23
RPS27P42677 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.61□□□□□ -0.23
RPS27P42677 AC011467.4-201ENST00000594891 528 ntBASIC13.61□□□□□ -0.23
RPS27P42677 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.61□□□□□ -0.23
RPS27P42677 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.61□□□□□ -0.23
RPS27P42677 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.61□□□□□ -0.23
RPS27P42677 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 AC100757.3-201ENST00000622361 1406 ntBASIC13.61□□□□□ -0.23
RPS27P42677 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RPS27P42677 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.61□□□□□ -0.23
RPS27P42677 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.61□□□□□ -0.23
RPS27P42677 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RPS27P42677 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RPS27P42677 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms