Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CKS2P33552 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.31□□□□□ -0.6
CKS2P33552 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS2P33552 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CKS2P33552 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.31□□□□□ -0.6
CKS2P33552 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CKS2P33552 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.31□□□□□ -0.6
CKS2P33552 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.31□□□□□ -0.6
CKS2P33552 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.31□□□□□ -0.6
CKS2P33552 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.31□□□□□ -0.6
CKS2P33552 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
CKS2P33552 AC011474.4-201ENST00000623523 2076 ntBASIC11.31□□□□□ -0.6
CKS2P33552 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CKS2P33552 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CKS2P33552 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CKS2P33552 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS2P33552 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS2P33552 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CKS2P33552 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
CKS2P33552 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS2P33552 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CKS2P33552 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
CKS2P33552 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.3□□□□□ -0.6
CKS2P33552 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 OR7E47P-204ENST00000575924 449 ntBASIC11.3□□□□□ -0.6
CKS2P33552 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC11.3□□□□□ -0.6
CKS2P33552 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.3□□□□□ -0.6
CKS2P33552 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 AC004790.2-201ENST00000623588 572 ntBASIC11.3□□□□□ -0.6
CKS2P33552 AC005593.1-201ENST00000624894 515 ntBASIC11.3□□□□□ -0.6
CKS2P33552 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS2P33552 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 MEX3B-202ENST00000558133 4333 ntBASIC11.3□□□□□ -0.6
CKS2P33552 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.3□□□□□ -0.6
CKS2P33552 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CKS2P33552 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS2P33552 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS2P33552 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.3□□□□□ -0.6
CKS2P33552 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
CKS2P33552 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.3□□□□□ -0.6
CKS2P33552 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CKS2P33552 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
CKS2P33552 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 AC089987.1-201ENST00000551654 2209 ntBASIC11.29□□□□□ -0.6
CKS2P33552 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.29□□□□□ -0.6
CKS2P33552 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.29□□□□□ -0.6
CKS2P33552 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CKS2P33552 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 AC015802.1-201ENST00000588104 1449 ntBASIC11.29□□□□□ -0.6
CKS2P33552 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CKS2P33552 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.29□□□□□ -0.6
CKS2P33552 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CKS2P33552 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms