Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.37■□□□□ 0.53
CHMLP26374 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.37■□□□□ 0.53
CHMLP26374 AL355385.1-201ENST00000606123 409 ntBASIC18.37■□□□□ 0.53
CHMLP26374 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMLP26374 AL136379.1-201ENST00000623471 2642 ntBASIC18.37■□□□□ 0.53
CHMLP26374 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.37■□□□□ 0.53
CHMLP26374 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMLP26374 KRT8P14-201ENST00000414254 1442 ntBASIC18.37■□□□□ 0.53
CHMLP26374 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMLP26374 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMLP26374 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMLP26374 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CHMLP26374 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMLP26374 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMLP26374 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMLP26374 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CHMLP26374 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CHMLP26374 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMLP26374 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMLP26374 FER1L4-210ENST00000615531 5998 ntBASIC18.37■□□□□ 0.53
CHMLP26374 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMLP26374 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMLP26374 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMLP26374 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
CHMLP26374 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMLP26374 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMLP26374 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMLP26374 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMLP26374 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMLP26374 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMLP26374 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMLP26374 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMLP26374 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMLP26374 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMLP26374 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHMLP26374 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMLP26374 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMLP26374 SOCS2P1-201ENST00000417727 557 ntBASIC18.36■□□□□ 0.53
CHMLP26374 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMLP26374 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMLP26374 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMLP26374 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMLP26374 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.36■□□□□ 0.53
CHMLP26374 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMLP26374 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMLP26374 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMLP26374 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMLP26374 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMLP26374 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMLP26374 AC008494.3-201ENST00000606615 944 ntBASIC18.36■□□□□ 0.53
CHMLP26374 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.36■□□□□ 0.53
CHMLP26374 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMLP26374 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMLP26374 AC026748.1-201ENST00000624349 3251 ntBASIC18.36■□□□□ 0.53
CHMLP26374 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMLP26374 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHMLP26374 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMLP26374 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMLP26374 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMLP26374 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMLP26374 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMLP26374 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHMLP26374 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMLP26374 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMLP26374 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMLP26374 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CHMLP26374 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
CHMLP26374 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHMLP26374 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMLP26374 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CHMLP26374 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMLP26374 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CHMLP26374 WASH4P-201ENST00000564273 1246 ntBASIC18.35■□□□□ 0.53
CHMLP26374 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHMLP26374 AC133539.2-201ENST00000604757 467 ntBASIC18.35■□□□□ 0.53
CHMLP26374 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMLP26374 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMLP26374 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMLP26374 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CHMLP26374 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHMLP26374 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHMLP26374 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMLP26374 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMLP26374 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMLP26374 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms