Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
COL8A2P25067 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.91□□□□□ -0.34
COL8A2P25067 KRT90P-201ENST00000549264 1064 ntBASIC12.91□□□□□ -0.34
COL8A2P25067 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.91□□□□□ -0.34
COL8A2P25067 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.91□□□□□ -0.34
COL8A2P25067 SAMD11P1-201ENST00000571429 661 ntBASIC12.91□□□□□ -0.34
COL8A2P25067 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.91□□□□□ -0.34
COL8A2P25067 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.91□□□□□ -0.34
COL8A2P25067 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.91□□□□□ -0.34
COL8A2P25067 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.91□□□□□ -0.34
COL8A2P25067 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.91□□□□□ -0.34
COL8A2P25067 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.91□□□□□ -0.34
COL8A2P25067 PRSS30P-206ENST00000641773 873 ntBASIC12.91□□□□□ -0.34
COL8A2P25067 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 AL138709.1-201ENST00000614840 1693 ntBASIC12.91□□□□□ -0.34
COL8A2P25067 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
COL8A2P25067 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.91□□□□□ -0.34
COL8A2P25067 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.91□□□□□ -0.34
COL8A2P25067 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
COL8A2P25067 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
COL8A2P25067 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.91□□□□□ -0.34
COL8A2P25067 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
COL8A2P25067 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.91□□□□□ -0.34
COL8A2P25067 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
COL8A2P25067 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
COL8A2P25067 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
COL8A2P25067 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
COL8A2P25067 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.9□□□□□ -0.34
COL8A2P25067 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
COL8A2P25067 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
COL8A2P25067 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.9□□□□□ -0.34
COL8A2P25067 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.9□□□□□ -0.34
COL8A2P25067 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.9□□□□□ -0.34
COL8A2P25067 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.9□□□□□ -0.34
COL8A2P25067 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
COL8A2P25067 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
COL8A2P25067 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
COL8A2P25067 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 ACTBP8-201ENST00000403258 1108 ntBASIC12.9□□□□□ -0.34
COL8A2P25067 RPL5P21-201ENST00000404620 815 ntBASIC12.9□□□□□ -0.34
COL8A2P25067 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.9□□□□□ -0.34
COL8A2P25067 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
COL8A2P25067 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
COL8A2P25067 AC078819.1-201ENST00000547454 765 ntBASIC12.9□□□□□ -0.34
COL8A2P25067 AC012085.1-201ENST00000548270 765 ntBASIC12.9□□□□□ -0.34
COL8A2P25067 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.9□□□□□ -0.34
COL8A2P25067 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.9□□□□□ -0.34
COL8A2P25067 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.9□□□□□ -0.34
COL8A2P25067 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
COL8A2P25067 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.9□□□□□ -0.34
COL8A2P25067 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.9□□□□□ -0.34
COL8A2P25067 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.9□□□□□ -0.34
COL8A2P25067 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 AC136621.1-201ENST00000624017 2304 ntBASIC12.9□□□□□ -0.34
COL8A2P25067 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
COL8A2P25067 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
COL8A2P25067 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.9□□□□□ -0.35
COL8A2P25067 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
COL8A2P25067 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
COL8A2P25067 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.89□□□□□ -0.35
COL8A2P25067 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
COL8A2P25067 LRRC59-203ENST00000576448 1531 ntBASIC12.89□□□□□ -0.35
COL8A2P25067 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
COL8A2P25067 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms