Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AC073389.1-201ENST00000595595 795 ntBASIC18.32■□□□□ 0.52
NCLP19338 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCLP19338 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCLP19338 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.32■□□□□ 0.52
NCLP19338 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NCLP19338 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NCLP19338 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCLP19338 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NCLP19338 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCLP19338 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NCLP19338 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
NCLP19338 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
NCLP19338 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NCLP19338 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NCLP19338 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NCLP19338 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.31■□□□□ 0.52
NCLP19338 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.31■□□□□ 0.52
NCLP19338 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NCLP19338 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NCLP19338 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.31■□□□□ 0.52
NCLP19338 AKAP8P1-201ENST00000434743 1349 ntBASIC18.31■□□□□ 0.52
NCLP19338 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC18.31■□□□□ 0.52
NCLP19338 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NCLP19338 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.31■□□□□ 0.52
NCLP19338 TFAMP1-201ENST00000412727 736 ntBASIC18.31■□□□□ 0.52
NCLP19338 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.31■□□□□ 0.52
NCLP19338 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.31■□□□□ 0.52
NCLP19338 SPDYE11-202ENST00000450699 704 ntBASIC18.31■□□□□ 0.52
NCLP19338 AC023141.5-201ENST00000458585 616 ntBASIC18.31■□□□□ 0.52
NCLP19338 CYMP-203ENST00000474680 1263 ntBASIC18.31■□□□□ 0.52
NCLP19338 HLA-J-203ENST00000494367 1087 ntBASIC18.31■□□□□ 0.52
NCLP19338 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NCLP19338 SPDYE9P-201ENST00000570642 692 ntBASIC18.31■□□□□ 0.52
NCLP19338 SPDYE10P-202ENST00000612005 668 ntBASIC18.31■□□□□ 0.52
NCLP19338 SPDYE8P-202ENST00000612377 668 ntBASIC18.31■□□□□ 0.52
NCLP19338 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.31■□□□□ 0.52
NCLP19338 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC18.31■□□□□ 0.52
NCLP19338 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.31■□□□□ 0.52
NCLP19338 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC18.31■□□□□ 0.52
NCLP19338 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NCLP19338 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NCLP19338 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
NCLP19338 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC18.31■□□□□ 0.52
NCLP19338 AC140479.7-201ENST00000636301 2332 ntBASIC18.31■□□□□ 0.52
NCLP19338 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
NCLP19338 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCLP19338 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.3■□□□□ 0.52
NCLP19338 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCLP19338 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCLP19338 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC18.3■□□□□ 0.52
NCLP19338 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NCLP19338 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCLP19338 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCLP19338 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.3■□□□□ 0.52
NCLP19338 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NCLP19338 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCLP19338 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NCLP19338 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCLP19338 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NCLP19338 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCLP19338 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCLP19338 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCLP19338 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
NCLP19338 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCLP19338 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCLP19338 AC004987.2-201ENST00000395959 1148 ntBASIC18.3■□□□□ 0.52
NCLP19338 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.3■□□□□ 0.52
NCLP19338 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
NCLP19338 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
NCLP19338 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.3■□□□□ 0.52
NCLP19338 RN7SL589P-201ENST00000481268 310 ntBASIC18.3■□□□□ 0.52
NCLP19338 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NCLP19338 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NCLP19338 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NCLP19338 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
NCLP19338 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms