Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRKCAP17252 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PRKCAP17252 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PRKCAP17252 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.25□□□□□ -0.13
PRKCAP17252 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.25□□□□□ -0.13
PRKCAP17252 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRKCAP17252 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
PRKCAP17252 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PRKCAP17252 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.25□□□□□ -0.13
PRKCAP17252 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.25□□□□□ -0.13
PRKCAP17252 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.25□□□□□ -0.13
PRKCAP17252 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.25□□□□□ -0.13
PRKCAP17252 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.25□□□□□ -0.13
PRKCAP17252 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PRKCAP17252 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.25□□□□□ -0.13
PRKCAP17252 AL355385.1-201ENST00000606123 409 ntBASIC14.25□□□□□ -0.13
PRKCAP17252 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
PRKCAP17252 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.25□□□□□ -0.13
PRKCAP17252 AL356585.2-201ENST00000625078 2396 ntBASIC14.25□□□□□ -0.13
PRKCAP17252 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRKCAP17252 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PRKCAP17252 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRKCAP17252 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PRKCAP17252 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PRKCAP17252 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRKCAP17252 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PRKCAP17252 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PRKCAP17252 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PRKCAP17252 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PRKCAP17252 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.24□□□□□ -0.13
PRKCAP17252 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.24□□□□□ -0.13
PRKCAP17252 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PRKCAP17252 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.24□□□□□ -0.13
PRKCAP17252 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 TOMM22P5-201ENST00000416399 439 ntBASIC14.24□□□□□ -0.13
PRKCAP17252 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.24□□□□□ -0.13
PRKCAP17252 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.24□□□□□ -0.13
PRKCAP17252 SPDYE18-201ENST00000510091 1050 ntBASIC14.24□□□□□ -0.13
PRKCAP17252 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PRKCAP17252 TIMM17BP1-201ENST00000545713 516 ntBASIC14.24□□□□□ -0.13
PRKCAP17252 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.24□□□□□ -0.13
PRKCAP17252 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
PRKCAP17252 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 DGCR9-201ENST00000609630 2415 ntBASIC14.24□□□□□ -0.13
PRKCAP17252 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PRKCAP17252 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.24□□□□□ -0.13
PRKCAP17252 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.24□□□□□ -0.13
PRKCAP17252 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRKCAP17252 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRKCAP17252 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PRKCAP17252 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PRKCAP17252 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.23□□□□□ -0.13
PRKCAP17252 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRKCAP17252 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PRKCAP17252 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PRKCAP17252 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.23□□□□□ -0.13
PRKCAP17252 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.23□□□□□ -0.13
PRKCAP17252 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.23□□□□□ -0.13
PRKCAP17252 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.23□□□□□ -0.13
PRKCAP17252 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRKCAP17252 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRKCAP17252 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PRKCAP17252 OR2I1P-210ENST00000642037 4691 ntBASIC14.23□□□□□ -0.13
PRKCAP17252 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms