Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.32■□□□□ 0.04
MMP2P08253 GNRHR2-203ENST00000581100 1187 ntBASIC15.32■□□□□ 0.04
MMP2P08253 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.32■□□□□ 0.04
MMP2P08253 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.32■□□□□ 0.04
MMP2P08253 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP2P08253 AC008735.3-201ENST00000596646 500 ntBASIC15.32■□□□□ 0.04
MMP2P08253 AC004466.1-201ENST00000599515 1080 ntBASIC15.32■□□□□ 0.04
MMP2P08253 AC145423.3-201ENST00000615987 467 ntBASIC15.32■□□□□ 0.04
MMP2P08253 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
MMP2P08253 AC106881.1-201ENST00000605849 3329 ntBASIC15.32■□□□□ 0.04
MMP2P08253 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
MMP2P08253 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MMP2P08253 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
MMP2P08253 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.32■□□□□ 0.04
MMP2P08253 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MMP2P08253 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP2P08253 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MMP2P08253 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP2P08253 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.32■□□□□ 0.04
MMP2P08253 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MMP2P08253 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.32■□□□□ 0.04
MMP2P08253 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.32■□□□□ 0.04
MMP2P08253 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP2P08253 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MMP2P08253 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.31■□□□□ 0.04
MMP2P08253 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 AC018529.2-202ENST00000611482 3087 ntBASIC15.31■□□□□ 0.04
MMP2P08253 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.31■□□□□ 0.04
MMP2P08253 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
MMP2P08253 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MMP2P08253 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.31■□□□□ 0.04
MMP2P08253 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.31■□□□□ 0.04
MMP2P08253 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.31■□□□□ 0.04
MMP2P08253 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.31■□□□□ 0.04
MMP2P08253 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.31■□□□□ 0.04
MMP2P08253 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.31■□□□□ 0.04
MMP2P08253 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
MMP2P08253 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 LRRC59-203ENST00000576448 1531 ntBASIC15.31■□□□□ 0.04
MMP2P08253 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.31■□□□□ 0.04
MMP2P08253 AL138709.1-201ENST00000614840 1693 ntBASIC15.31■□□□□ 0.04
MMP2P08253 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
MMP2P08253 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MMP2P08253 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
MMP2P08253 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 AC018442.1-201ENST00000421439 2061 ntBASIC15.31■□□□□ 0.04
MMP2P08253 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
MMP2P08253 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MMP2P08253 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
MMP2P08253 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP2P08253 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
MMP2P08253 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP2P08253 TTTY23B-201ENST00000442790 549 ntBASIC15.3■□□□□ 0.04
MMP2P08253 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.3■□□□□ 0.04
MMP2P08253 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.3■□□□□ 0.04
MMP2P08253 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.3■□□□□ 0.04
MMP2P08253 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 SLC25A47P1-201ENST00000531577 414 ntBASIC15.3■□□□□ 0.04
MMP2P08253 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MMP2P08253 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
MMP2P08253 TSPY26P-202ENST00000565928 3884 ntBASIC15.3■□□□□ 0.04
MMP2P08253 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.3■□□□□ 0.04
MMP2P08253 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms