Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.4■□□□□ 0.06
RETP07949 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RETP07949 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RETP07949 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RETP07949 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.4■□□□□ 0.06
RETP07949 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.4■□□□□ 0.06
RETP07949 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.4■□□□□ 0.06
RETP07949 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.4■□□□□ 0.06
RETP07949 AC079178.1-201ENST00000420915 656 ntBASIC15.4■□□□□ 0.06
RETP07949 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.4■□□□□ 0.06
RETP07949 SPTLC1P5-201ENST00000450718 252 ntBASIC15.4■□□□□ 0.06
RETP07949 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 AC134698.3-201ENST00000523880 214 ntBASIC15.4■□□□□ 0.06
RETP07949 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.4■□□□□ 0.06
RETP07949 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.4■□□□□ 0.06
RETP07949 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.4■□□□□ 0.06
RETP07949 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.4■□□□□ 0.06
RETP07949 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RETP07949 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
RETP07949 AC023157.3-201ENST00000619086 2088 ntBASIC15.4■□□□□ 0.06
RETP07949 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.4■□□□□ 0.06
RETP07949 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.4■□□□□ 0.06
RETP07949 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
RETP07949 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
RETP07949 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RETP07949 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.39■□□□□ 0.05
RETP07949 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.39■□□□□ 0.05
RETP07949 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.39■□□□□ 0.05
RETP07949 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.39■□□□□ 0.05
RETP07949 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.39■□□□□ 0.05
RETP07949 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.39■□□□□ 0.05
RETP07949 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.39■□□□□ 0.05
RETP07949 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RETP07949 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.39■□□□□ 0.05
RETP07949 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.39■□□□□ 0.05
RETP07949 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RETP07949 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.39■□□□□ 0.05
RETP07949 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.39■□□□□ 0.05
RETP07949 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 CNN2P10-201ENST00000443067 918 ntBASIC15.39■□□□□ 0.05
RETP07949 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RETP07949 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.39■□□□□ 0.05
RETP07949 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.39■□□□□ 0.05
RETP07949 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.39■□□□□ 0.05
RETP07949 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.39■□□□□ 0.05
RETP07949 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RETP07949 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
RETP07949 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
RETP07949 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RETP07949 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.39■□□□□ 0.05
RETP07949 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RETP07949 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RETP07949 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RETP07949 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.39■□□□□ 0.05
RETP07949 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RETP07949 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RETP07949 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RETP07949 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RETP07949 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms