Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 LDHBP1-201ENST00000455730 1119 ntBASIC15.24■□□□□ 0.03
CAPNS1P04632 AKR7A2P1-201ENST00000460134 915 ntBASIC15.24■□□□□ 0.03
CAPNS1P04632 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.24■□□□□ 0.03
CAPNS1P04632 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.24■□□□□ 0.03
CAPNS1P04632 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.24■□□□□ 0.03
CAPNS1P04632 AC079316.1-201ENST00000548397 411 ntBASIC15.24■□□□□ 0.03
CAPNS1P04632 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CAPNS1P04632 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.24■□□□□ 0.03
CAPNS1P04632 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPNS1P04632 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.24■□□□□ 0.03
CAPNS1P04632 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPNS1P04632 AL022328.3-201ENST00000607943 679 ntBASIC15.24■□□□□ 0.03
CAPNS1P04632 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPNS1P04632 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPNS1P04632 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CAPNS1P04632 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPNS1P04632 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.24■□□□□ 0.03
CAPNS1P04632 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.24■□□□□ 0.03
CAPNS1P04632 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPNS1P04632 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CAPNS1P04632 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.24■□□□□ 0.03
CAPNS1P04632 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPNS1P04632 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CAPNS1P04632 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPNS1P04632 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPNS1P04632 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPNS1P04632 AL607033.1-201ENST00000623900 1599 ntBASIC15.24■□□□□ 0.03
CAPNS1P04632 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPNS1P04632 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPNS1P04632 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 AC011477.6-201ENST00000604980 1927 ntBASIC15.23■□□□□ 0.03
CAPNS1P04632 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CAPNS1P04632 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CAPNS1P04632 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CAPNS1P04632 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPNS1P04632 HINT2P1-201ENST00000419438 481 ntBASIC15.23■□□□□ 0.03
CAPNS1P04632 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.23■□□□□ 0.03
CAPNS1P04632 HIST3H2BA-201ENST00000436555 524 ntBASIC15.23■□□□□ 0.03
CAPNS1P04632 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPNS1P04632 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPNS1P04632 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPNS1P04632 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPNS1P04632 ACTG1P17-201ENST00000558391 1119 ntBASIC15.23■□□□□ 0.03
CAPNS1P04632 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPNS1P04632 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPNS1P04632 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.23■□□□□ 0.03
CAPNS1P04632 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.23■□□□□ 0.03
CAPNS1P04632 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CAPNS1P04632 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CAPNS1P04632 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CAPNS1P04632 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CAPNS1P04632 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 FGD5P1-202ENST00000614866 2498 ntBASIC15.23■□□□□ 0.03
CAPNS1P04632 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.23■□□□□ 0.03
CAPNS1P04632 MROH4P-201ENST00000431302 1578 ntBASIC15.23■□□□□ 0.03
CAPNS1P04632 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CAPNS1P04632 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CAPNS1P04632 AC005622.1-201ENST00000636801 1703 ntBASIC15.23■□□□□ 0.03
CAPNS1P04632 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CAPNS1P04632 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.22■□□□□ 0.03
CAPNS1P04632 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPNS1P04632 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.22■□□□□ 0.03
CAPNS1P04632 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPNS1P04632 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPNS1P04632 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPNS1P04632 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPNS1P04632 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPNS1P04632 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPNS1P04632 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPNS1P04632 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CAPNS1P04632 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPNS1P04632 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CAPNS1P04632 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPNS1P04632 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPNS1P04632 AC041040.2-201ENST00000622926 2899 ntBASIC15.22■□□□□ 0.03
CAPNS1P04632 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPNS1P04632 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms