Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
CD74P04233 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CD74P04233 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
CD74P04233 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.87□□□□□ -0.35
CD74P04233 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 AL355306.1-201ENST00000415580 579 ntBASIC12.87□□□□□ -0.35
CD74P04233 AL031284.1-201ENST00000419297 478 ntBASIC12.87□□□□□ -0.35
CD74P04233 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.87□□□□□ -0.35
CD74P04233 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.87□□□□□ -0.35
CD74P04233 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.87□□□□□ -0.35
CD74P04233 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.87□□□□□ -0.35
CD74P04233 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.87□□□□□ -0.35
CD74P04233 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.87□□□□□ -0.35
CD74P04233 UNC93B7-201ENST00000509439 705 ntBASIC12.87□□□□□ -0.35
CD74P04233 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.87□□□□□ -0.35
CD74P04233 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CD74P04233 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.87□□□□□ -0.35
CD74P04233 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.87□□□□□ -0.35
CD74P04233 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 AC025181.2-201ENST00000606994 802 ntBASIC12.87□□□□□ -0.35
CD74P04233 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.87□□□□□ -0.35
CD74P04233 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CD74P04233 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CD74P04233 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 CR383656.2-201ENST00000548656 2254 ntBASIC12.87□□□□□ -0.35
CD74P04233 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CD74P04233 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.87□□□□□ -0.35
CD74P04233 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD74P04233 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.86□□□□□ -0.35
CD74P04233 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CD74P04233 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.86□□□□□ -0.35
CD74P04233 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CD74P04233 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CD74P04233 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.86□□□□□ -0.35
CD74P04233 AL450487.1-201ENST00000426799 995 ntBASIC12.86□□□□□ -0.35
CD74P04233 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.86□□□□□ -0.35
CD74P04233 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.86□□□□□ -0.35
CD74P04233 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.86□□□□□ -0.35
CD74P04233 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CD74P04233 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.86□□□□□ -0.35
CD74P04233 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.86□□□□□ -0.35
CD74P04233 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.86□□□□□ -0.35
CD74P04233 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.86□□□□□ -0.35
CD74P04233 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CD74P04233 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.86□□□□□ -0.35
CD74P04233 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CD74P04233 INE2-201ENST00000630399 1874 ntBASIC12.86□□□□□ -0.35
CD74P04233 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.86□□□□□ -0.35
CD74P04233 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
CD74P04233 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CD74P04233 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CD74P04233 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CD74P04233 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
CD74P04233 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CD74P04233 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD74P04233 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CD74P04233 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms