Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC000095.1-201ENST00000603208 874 ntBASIC14.38□□□□□ -0.11
PDGFAP04085 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PDGFAP04085 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
PDGFAP04085 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.38□□□□□ -0.11
PDGFAP04085 AC013268.4-201ENST00000637413 2228 ntBASIC14.38□□□□□ -0.11
PDGFAP04085 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.38□□□□□ -0.11
PDGFAP04085 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.38□□□□□ -0.11
PDGFAP04085 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PDGFAP04085 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.37□□□□□ -0.11
PDGFAP04085 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.37□□□□□ -0.11
PDGFAP04085 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.37□□□□□ -0.11
PDGFAP04085 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PDGFAP04085 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
PDGFAP04085 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.37□□□□□ -0.11
PDGFAP04085 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
PDGFAP04085 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.37□□□□□ -0.11
PDGFAP04085 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.37□□□□□ -0.11
PDGFAP04085 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 C2orf27AP3-201ENST00000434123 579 ntBASIC14.37□□□□□ -0.11
PDGFAP04085 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.37□□□□□ -0.11
PDGFAP04085 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.37□□□□□ -0.11
PDGFAP04085 AC026410.3-201ENST00000514280 936 ntBASIC14.37□□□□□ -0.11
PDGFAP04085 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC14.37□□□□□ -0.11
PDGFAP04085 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.37□□□□□ -0.11
PDGFAP04085 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC14.37□□□□□ -0.11
PDGFAP04085 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.37□□□□□ -0.11
PDGFAP04085 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.37□□□□□ -0.11
PDGFAP04085 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.37□□□□□ -0.11
PDGFAP04085 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 AL450472.2-201ENST00000603663 1156 ntBASIC14.37□□□□□ -0.11
PDGFAP04085 AC097359.3-201ENST00000603982 1210 ntBASIC14.37□□□□□ -0.11
PDGFAP04085 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.37□□□□□ -0.11
PDGFAP04085 AL354718.3-201ENST00000616414 581 ntBASIC14.37□□□□□ -0.11
PDGFAP04085 CR382287.1-201ENST00000623954 586 ntBASIC14.37□□□□□ -0.11
PDGFAP04085 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PDGFAP04085 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.37□□□□□ -0.11
PDGFAP04085 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.37□□□□□ -0.11
PDGFAP04085 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.37□□□□□ -0.11
PDGFAP04085 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.37□□□□□ -0.11
PDGFAP04085 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDGFAP04085 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.37□□□□□ -0.11
PDGFAP04085 AC015656.1-201ENST00000624209 3578 ntBASIC14.37□□□□□ -0.11
PDGFAP04085 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PDGFAP04085 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.36□□□□□ -0.11
PDGFAP04085 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.36□□□□□ -0.11
PDGFAP04085 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PDGFAP04085 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.36□□□□□ -0.11
PDGFAP04085 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PDGFAP04085 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.36□□□□□ -0.11
PDGFAP04085 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PDGFAP04085 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
PDGFAP04085 DRD5P1-201ENST00000456605 1438 ntBASIC14.36□□□□□ -0.11
PDGFAP04085 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.36□□□□□ -0.11
PDGFAP04085 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 AC005089.1-201ENST00000619486 2241 ntBASIC14.36□□□□□ -0.11
PDGFAP04085 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDGFAP04085 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.36□□□□□ -0.11
PDGFAP04085 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.36□□□□□ -0.11
PDGFAP04085 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.36□□□□□ -0.11
PDGFAP04085 FAM197Y7-201ENST00000432892 766 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms