Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 LINC01101-201ENST00000622953 1884 ntBASIC13.61□□□□□ -0.23
APOC1P02654 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
APOC1P02654 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
APOC1P02654 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
APOC1P02654 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOC1P02654 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC1P02654 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC1P02654 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 AC007292.2-201ENST00000593524 1812 ntBASIC13.6□□□□□ -0.23
APOC1P02654 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
APOC1P02654 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
APOC1P02654 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC1P02654 TSEN15P1-201ENST00000423257 515 ntBASIC13.6□□□□□ -0.23
APOC1P02654 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 KRT18P43-201ENST00000469825 1281 ntBASIC13.6□□□□□ -0.23
APOC1P02654 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC1P02654 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 AC005840.4-201ENST00000541242 2494 ntBASIC13.6□□□□□ -0.23
APOC1P02654 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC1P02654 AC004449.1-201ENST00000564240 433 ntBASIC13.6□□□□□ -0.23
APOC1P02654 AC015911.4-201ENST00000588022 1070 ntBASIC13.6□□□□□ -0.23
APOC1P02654 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 AC073592.8-201ENST00000624126 511 ntBASIC13.6□□□□□ -0.23
APOC1P02654 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.6□□□□□ -0.23
APOC1P02654 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
APOC1P02654 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC1P02654 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
APOC1P02654 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC1P02654 TUBB3P1-201ENST00000405796 1332 ntBASIC13.6□□□□□ -0.23
APOC1P02654 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC1P02654 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC1P02654 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
APOC1P02654 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC1P02654 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC1P02654 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.59□□□□□ -0.23
APOC1P02654 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.59□□□□□ -0.23
APOC1P02654 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
APOC1P02654 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
APOC1P02654 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
APOC1P02654 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
APOC1P02654 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.59□□□□□ -0.23
APOC1P02654 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC1P02654 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC1P02654 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC1P02654 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.59□□□□□ -0.23
APOC1P02654 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC1P02654 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
APOC1P02654 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms