Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-CO1P00395 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MT-CO1P00395 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.69■□□□□ 0.1
MT-CO1P00395 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-CO1P00395 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
MT-CO1P00395 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-CO1P00395 AC134312.5-201ENST00000568031 1313 ntBASIC15.68■□□□□ 0.1
MT-CO1P00395 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-CO1P00395 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
MT-CO1P00395 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MT-CO1P00395 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
MT-CO1P00395 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MT-CO1P00395 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MT-CO1P00395 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 AC087481.3-201ENST00000602886 1894 ntBASIC15.68■□□□□ 0.1
MT-CO1P00395 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-CO1P00395 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-CO1P00395 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
MT-CO1P00395 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
MT-CO1P00395 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-CO1P00395 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-CO1P00395 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.68■□□□□ 0.1
MT-CO1P00395 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-CO1P00395 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-CO1P00395 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.68■□□□□ 0.1
MT-CO1P00395 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MT-CO1P00395 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-CO1P00395 AC009486.1-201ENST00000569860 813 ntBASIC15.68■□□□□ 0.1
MT-CO1P00395 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.68■□□□□ 0.1
MT-CO1P00395 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.68■□□□□ 0.1
MT-CO1P00395 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.68■□□□□ 0.1
MT-CO1P00395 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-CO1P00395 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-CO1P00395 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-CO1P00395 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
MT-CO1P00395 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.68■□□□□ 0.1
MT-CO1P00395 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.68■□□□□ 0.1
MT-CO1P00395 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-CO1P00395 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.68■□□□□ 0.1
MT-CO1P00395 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-CO1P00395 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
MT-CO1P00395 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-CO1P00395 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-CO1P00395 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-CO1P00395 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-CO1P00395 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-CO1P00395 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-CO1P00395 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-CO1P00395 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-CO1P00395 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-CO1P00395 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-CO1P00395 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-CO1P00395 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-CO1P00395 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-CO1P00395 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.67■□□□□ 0.1
MT-CO1P00395 ACKR1-201ENST00000368121 1240 ntBASIC15.67■□□□□ 0.1
MT-CO1P00395 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.67■□□□□ 0.1
MT-CO1P00395 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-CO1P00395 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.67■□□□□ 0.1
MT-CO1P00395 AC012441.1-201ENST00000446669 685 ntBASIC15.67■□□□□ 0.1
MT-CO1P00395 IGHV3-71-201ENST00000523324 359 ntBASIC15.67■□□□□ 0.1
MT-CO1P00395 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.67■□□□□ 0.1
MT-CO1P00395 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-CO1P00395 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-CO1P00395 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-CO1P00395 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-CO1P00395 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.67■□□□□ 0.1
MT-CO1P00395 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MT-CO1P00395 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MT-CO1P00395 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.67■□□□□ 0.1
MT-CO1P00395 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms