Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 AC006453.4-201ENST00000636949 1252 ntBASIC15.25■□□□□ 0.03
PCDH8O95206 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH8O95206 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH8O95206 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH8O95206 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH8O95206 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PCDH8O95206 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDH8O95206 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH8O95206 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH8O95206 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
PCDH8O95206 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDH8O95206 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH8O95206 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH8O95206 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH8O95206 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH8O95206 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDH8O95206 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH8O95206 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH8O95206 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDH8O95206 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDH8O95206 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH8O95206 AC087481.3-201ENST00000602886 1894 ntBASIC15.25■□□□□ 0.03
PCDH8O95206 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDH8O95206 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PCDH8O95206 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH8O95206 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH8O95206 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH8O95206 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDH8O95206 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH8O95206 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PCDH8O95206 RPL13AP20-201ENST00000459725 609 ntBASIC15.24■□□□□ 0.03
PCDH8O95206 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH8O95206 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH8O95206 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.24■□□□□ 0.03
PCDH8O95206 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PCDH8O95206 DUX4L45-201ENST00000566406 1057 ntBASIC15.24■□□□□ 0.03
PCDH8O95206 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDH8O95206 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.24■□□□□ 0.03
PCDH8O95206 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH8O95206 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PCDH8O95206 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PCDH8O95206 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PCDH8O95206 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.24■□□□□ 0.03
PCDH8O95206 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDH8O95206 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDH8O95206 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDH8O95206 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
PCDH8O95206 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDH8O95206 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH8O95206 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PCDH8O95206 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PCDH8O95206 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH8O95206 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDH8O95206 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDH8O95206 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDH8O95206 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDH8O95206 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDH8O95206 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH8O95206 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH8O95206 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH8O95206 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.23■□□□□ 0.03
PCDH8O95206 ENPP7P14-201ENST00000621765 1040 ntBASIC15.23■□□□□ 0.03
PCDH8O95206 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDH8O95206 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDH8O95206 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PCDH8O95206 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms