Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NKX2-2O95096 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX2-2O95096 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.07□□□□□ -0.16
NKX2-2O95096 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NKX2-2O95096 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.07□□□□□ -0.16
NKX2-2O95096 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.06□□□□□ -0.16
NKX2-2O95096 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-2O95096 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
NKX2-2O95096 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NKX2-2O95096 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NKX2-2O95096 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-2O95096 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-2O95096 AC011270.2-201ENST00000624293 2550 ntBASIC14.06□□□□□ -0.16
NKX2-2O95096 AC063926.3-201ENST00000624734 5658 ntBASIC14.06□□□□□ -0.16
NKX2-2O95096 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
NKX2-2O95096 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NKX2-2O95096 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-2O95096 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 ACTBP8-201ENST00000403258 1108 ntBASIC14.06□□□□□ -0.16
NKX2-2O95096 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
NKX2-2O95096 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.06□□□□□ -0.16
NKX2-2O95096 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.06□□□□□ -0.16
NKX2-2O95096 AC022137.2-201ENST00000503482 481 ntBASIC14.06□□□□□ -0.16
NKX2-2O95096 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-2O95096 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.06□□□□□ -0.16
NKX2-2O95096 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.06□□□□□ -0.16
NKX2-2O95096 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-2O95096 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-2O95096 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.06□□□□□ -0.16
NKX2-2O95096 AC138761.1-201ENST00000584393 385 ntBASIC14.06□□□□□ -0.16
NKX2-2O95096 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-2O95096 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.06□□□□□ -0.16
NKX2-2O95096 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.06□□□□□ -0.16
NKX2-2O95096 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
NKX2-2O95096 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 AC018442.1-201ENST00000421439 2061 ntBASIC14.06□□□□□ -0.16
NKX2-2O95096 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
NKX2-2O95096 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.06□□□□□ -0.16
NKX2-2O95096 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.06□□□□□ -0.16
NKX2-2O95096 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NKX2-2O95096 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX2-2O95096 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX2-2O95096 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NKX2-2O95096 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
NKX2-2O95096 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NKX2-2O95096 NFIC-211ENST00000641145 8399 ntBASIC14.05□□□□□ -0.16
NKX2-2O95096 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.05□□□□□ -0.16
NKX2-2O95096 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 AC023090.2-201ENST00000625182 2110 ntBASIC14.05□□□□□ -0.16
NKX2-2O95096 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NKX2-2O95096 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
NKX2-2O95096 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NKX2-2O95096 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
NKX2-2O95096 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.05□□□□□ -0.16
NKX2-2O95096 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NKX2-2O95096 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NKX2-2O95096 AC093433.1-201ENST00000458048 571 ntBASIC14.05□□□□□ -0.16
NKX2-2O95096 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms