Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.48■□□□□ 0.39
GADD45BO75293 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.48■□□□□ 0.39
GADD45BO75293 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC17.48■□□□□ 0.39
GADD45BO75293 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GADD45BO75293 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
GADD45BO75293 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.48■□□□□ 0.39
GADD45BO75293 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.48■□□□□ 0.39
GADD45BO75293 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.48■□□□□ 0.39
GADD45BO75293 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
GADD45BO75293 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
GADD45BO75293 AL589739.1-201ENST00000607720 493 ntBASIC17.48■□□□□ 0.39
GADD45BO75293 MIR6069-201ENST00000620069 79 ntBASIC17.48■□□□□ 0.39
GADD45BO75293 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.48■□□□□ 0.39
GADD45BO75293 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GADD45BO75293 AL033527.5-202ENST00000641632 1098 ntBASIC17.48■□□□□ 0.39
GADD45BO75293 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 AL035456.1-201ENST00000456064 1369 ntBASIC17.48■□□□□ 0.39
GADD45BO75293 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
GADD45BO75293 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.48■□□□□ 0.39
GADD45BO75293 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.48■□□□□ 0.39
GADD45BO75293 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.48■□□□□ 0.39
GADD45BO75293 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GADD45BO75293 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GADD45BO75293 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GADD45BO75293 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GADD45BO75293 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.47■□□□□ 0.39
GADD45BO75293 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GADD45BO75293 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
GADD45BO75293 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
GADD45BO75293 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.47■□□□□ 0.39
GADD45BO75293 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.47■□□□□ 0.39
GADD45BO75293 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
GADD45BO75293 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.47■□□□□ 0.39
GADD45BO75293 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 RPL37AP1-201ENST00000412502 279 ntBASIC17.47■□□□□ 0.39
GADD45BO75293 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.47■□□□□ 0.39
GADD45BO75293 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.47■□□□□ 0.39
GADD45BO75293 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.47■□□□□ 0.39
GADD45BO75293 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.47■□□□□ 0.39
GADD45BO75293 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.47■□□□□ 0.39
GADD45BO75293 MTDHP5-201ENST00000598980 586 ntBASIC17.47■□□□□ 0.39
GADD45BO75293 AC055811.4-201ENST00000624039 1754 ntBASIC17.47■□□□□ 0.39
GADD45BO75293 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
GADD45BO75293 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 OR2I1P-210ENST00000642037 4691 ntBASIC17.47■□□□□ 0.39
GADD45BO75293 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GADD45BO75293 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GADD45BO75293 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC17.47■□□□□ 0.39
GADD45BO75293 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GADD45BO75293 AL360270.3-201ENST00000609118 1348 ntBASIC17.47■□□□□ 0.39
GADD45BO75293 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GADD45BO75293 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
GADD45BO75293 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GADD45BO75293 CICP17-201ENST00000418553 2377 ntBASIC17.46■□□□□ 0.39
GADD45BO75293 AL137784.3-201ENST00000623858 2288 ntBASIC17.46■□□□□ 0.39
GADD45BO75293 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GADD45BO75293 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GADD45BO75293 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
GADD45BO75293 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
GADD45BO75293 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GADD45BO75293 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms