Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SMARCA5O60264 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCA5O60264 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCA5O60264 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SMARCA5O60264 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCA5O60264 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SMARCA5O60264 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.82■□□□□ 0.6
SMARCA5O60264 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
SMARCA5O60264 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCA5O60264 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCA5O60264 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SMARCA5O60264 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCA5O60264 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
SMARCA5O60264 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SMARCA5O60264 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCA5O60264 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.82■□□□□ 0.6
SMARCA5O60264 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.82■□□□□ 0.6
SMARCA5O60264 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCA5O60264 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCA5O60264 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.82■□□□□ 0.6
SMARCA5O60264 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.82■□□□□ 0.6
SMARCA5O60264 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.82■□□□□ 0.6
SMARCA5O60264 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCA5O60264 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCA5O60264 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
SMARCA5O60264 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
SMARCA5O60264 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCA5O60264 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SMARCA5O60264 LINC00552-201ENST00000625151 2579 ntBASIC18.82■□□□□ 0.6
SMARCA5O60264 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCA5O60264 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
SMARCA5O60264 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCA5O60264 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCA5O60264 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCA5O60264 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCA5O60264 MTHFR-210ENST00000641407 2387 ntBASIC18.81■□□□□ 0.6
SMARCA5O60264 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.81■□□□□ 0.6
SMARCA5O60264 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
SMARCA5O60264 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCA5O60264 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.81■□□□□ 0.6
SMARCA5O60264 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.81■□□□□ 0.6
SMARCA5O60264 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SMARCA5O60264 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.81■□□□□ 0.6
SMARCA5O60264 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCA5O60264 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCA5O60264 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.81■□□□□ 0.6
SMARCA5O60264 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCA5O60264 MIR3197-201ENST00000582241 73 ntBASIC18.81■□□□□ 0.6
SMARCA5O60264 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCA5O60264 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.81■□□□□ 0.6
SMARCA5O60264 PRSS30P-206ENST00000641773 873 ntBASIC18.81■□□□□ 0.6
SMARCA5O60264 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SMARCA5O60264 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SMARCA5O60264 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.81■□□□□ 0.6
SMARCA5O60264 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMARCA5O60264 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.81■□□□□ 0.6
SMARCA5O60264 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.8■□□□□ 0.6
SMARCA5O60264 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SMARCA5O60264 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCA5O60264 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCA5O60264 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCA5O60264 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.8■□□□□ 0.6
SMARCA5O60264 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCA5O60264 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCA5O60264 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCA5O60264 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCA5O60264 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMARCA5O60264 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms