Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SSSCA1O60232 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SSSCA1O60232 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SSSCA1O60232 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.52□□□□□ -0.4
SSSCA1O60232 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSSCA1O60232 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
SSSCA1O60232 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.52□□□□□ -0.4
SSSCA1O60232 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.52□□□□□ -0.4
SSSCA1O60232 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSSCA1O60232 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SSSCA1O60232 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSSCA1O60232 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.52□□□□□ -0.4
SSSCA1O60232 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.52□□□□□ -0.4
SSSCA1O60232 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSSCA1O60232 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSSCA1O60232 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSSCA1O60232 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SSSCA1O60232 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSSCA1O60232 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SSSCA1O60232 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.52□□□□□ -0.41
SSSCA1O60232 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
SSSCA1O60232 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.52□□□□□ -0.41
SSSCA1O60232 AZGP1P1-201ENST00000411909 902 ntBASIC12.52□□□□□ -0.41
SSSCA1O60232 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.52□□□□□ -0.41
SSSCA1O60232 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.52□□□□□ -0.41
SSSCA1O60232 FAM210CP-201ENST00000445714 574 ntBASIC12.52□□□□□ -0.41
SSSCA1O60232 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.52□□□□□ -0.41
SSSCA1O60232 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.52□□□□□ -0.41
SSSCA1O60232 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 KRT18P35-201ENST00000510488 1269 ntBASIC12.52□□□□□ -0.41
SSSCA1O60232 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.52□□□□□ -0.41
SSSCA1O60232 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.52□□□□□ -0.41
SSSCA1O60232 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.52□□□□□ -0.41
SSSCA1O60232 AC068137.2-201ENST00000605408 478 ntBASIC12.52□□□□□ -0.41
SSSCA1O60232 AC004877.2-201ENST00000623941 599 ntBASIC12.52□□□□□ -0.41
SSSCA1O60232 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SSSCA1O60232 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.52□□□□□ -0.41
SSSCA1O60232 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.52□□□□□ -0.41
SSSCA1O60232 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.52□□□□□ -0.41
SSSCA1O60232 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SSSCA1O60232 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SSSCA1O60232 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SSSCA1O60232 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SSSCA1O60232 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SSSCA1O60232 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.52□□□□□ -0.41
SSSCA1O60232 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.52□□□□□ -0.41
SSSCA1O60232 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SSSCA1O60232 CICP17-201ENST00000418553 2377 ntBASIC12.51□□□□□ -0.41
SSSCA1O60232 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.51□□□□□ -0.41
SSSCA1O60232 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.51□□□□□ -0.41
SSSCA1O60232 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.51□□□□□ -0.41
SSSCA1O60232 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.51□□□□□ -0.41
SSSCA1O60232 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SSSCA1O60232 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SSSCA1O60232 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SSSCA1O60232 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSSCA1O60232 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms