Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 FAM86KP-201ENST00000509817 987 ntBASIC20.53■□□□□ 0.88
CHD2O14647 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC20.53■□□□□ 0.88
CHD2O14647 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC20.53■□□□□ 0.88
CHD2O14647 AC055811.3-201ENST00000584952 686 ntBASIC20.53■□□□□ 0.88
CHD2O14647 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD2O14647 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC20.53■□□□□ 0.88
CHD2O14647 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC20.53■□□□□ 0.88
CHD2O14647 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC20.53■□□□□ 0.88
CHD2O14647 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD2O14647 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD2O14647 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD2O14647 AL672207.1-201ENST00000328462 1570 ntBASIC20.52■□□□□ 0.88
CHD2O14647 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD2O14647 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD2O14647 API5-208ENST00000531273 1868 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD2O14647 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CHD2O14647 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD2O14647 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD2O14647 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD2O14647 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD2O14647 SURF4-203ENST00000371991 715 ntTSL 3 BASIC20.52■□□□□ 0.88
CHD2O14647 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD2O14647 IGHVIII-5-2-201ENST00000522505 261 ntBASIC20.52■□□□□ 0.88
CHD2O14647 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
CHD2O14647 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC20.52■□□□□ 0.88
CHD2O14647 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD2O14647 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD2O14647 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.52■□□□□ 0.87
CHD2O14647 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHD2O14647 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
CHD2O14647 AL513523.2-202ENST00000427283 2040 ntBASIC20.52■□□□□ 0.87
CHD2O14647 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD2O14647 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHD2O14647 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD2O14647 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CHD2O14647 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHD2O14647 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD2O14647 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC20.51■□□□□ 0.87
CHD2O14647 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD2O14647 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHD2O14647 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC20.51■□□□□ 0.87
CHD2O14647 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC20.51■□□□□ 0.87
CHD2O14647 USB1-205ENST00000561743 1135 ntTSL 3 BASIC20.51■□□□□ 0.87
CHD2O14647 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CHD2O14647 AC010976.2-201ENST00000609697 852 ntBASIC20.51■□□□□ 0.87
CHD2O14647 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD2O14647 ZNF436-AS1-201ENST00000335648 2547 ntBASIC20.51■□□□□ 0.87
CHD2O14647 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.51■□□□□ 0.87
CHD2O14647 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.51■□□□□ 0.87
CHD2O14647 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHD2O14647 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD2O14647 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHD2O14647 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD2O14647 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD2O14647 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CHD2O14647 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC20.5■□□□□ 0.87
CHD2O14647 SCARNA12-201ENST00000459155 270 ntBASIC20.5■□□□□ 0.87
CHD2O14647 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
CHD2O14647 HMGB1P24-201ENST00000611897 328 ntBASIC20.5■□□□□ 0.87
CHD2O14647 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC20.5■□□□□ 0.87
CHD2O14647 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD2O14647 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.5■□□□□ 0.87
CHD2O14647 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHD2O14647 MRPL37P1-201ENST00000592451 1337 ntBASIC20.5■□□□□ 0.87
CHD2O14647 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHD2O14647 CICP13-201ENST00000422015 2789 ntBASIC20.5■□□□□ 0.87
CHD2O14647 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD2O14647 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
CHD2O14647 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CHD2O14647 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CHD2O14647 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CHD2O14647 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC20.5■□□□□ 0.87
CHD2O14647 OR8T1P-201ENST00000421347 918 ntBASIC20.5■□□□□ 0.87
CHD2O14647 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHD2O14647 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC20.5■□□□□ 0.87
CHD2O14647 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC20.5■□□□□ 0.87
CHD2O14647 AL118522.1-201ENST00000611368 560 ntBASIC20.5■□□□□ 0.87
CHD2O14647 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD2O14647 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD2O14647 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC20.5■□□□□ 0.87
CHD2O14647 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHD2O14647 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CHD2O14647 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD2O14647 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD2O14647 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHD2O14647 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD2O14647 PYY2-201ENST00000315776 282 ntBASIC20.49■□□□□ 0.87
CHD2O14647 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD2O14647 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC20.49■□□□□ 0.87
CHD2O14647 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD2O14647 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC20.49■□□□□ 0.87
CHD2O14647 FAM86B3P-203ENST00000523992 854 ntBASIC20.49■□□□□ 0.87
CHD2O14647 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD2O14647 ELP5-212ENST00000574255 671 ntTSL 2 BASIC20.49■□□□□ 0.87
CHD2O14647 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
CHD2O14647 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHD2O14647 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CHD2O14647 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms