Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRAMEF25A6NGN4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 AL133267.1-201ENST00000398220 340 ntBASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 CRB3P1-201ENST00000449338 276 ntBASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 AC140912.1-201ENST00000577171 1054 ntBASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 AL391069.4-201ENST00000609583 481 ntBASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRAMEF25A6NGN4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PRAMEF25A6NGN4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PRAMEF25A6NGN4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PRAMEF25A6NGN4 AC018529.2-202ENST00000611482 3087 ntBASIC14.33□□□□□ -0.11
PRAMEF25A6NGN4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PRAMEF25A6NGN4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PRAMEF25A6NGN4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 AC093726.1-201ENST00000608064 963 ntBASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.33□□□□□ -0.12
PRAMEF25A6NGN4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms