Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 AC092135.3-201ENST00000624151 1846 ntBASIC13.11□□□□□ -0.31
TMEM235A6NFC5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TMEM235A6NFC5 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.11□□□□□ -0.31
TMEM235A6NFC5 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 AC152010.1-201ENST00000415779 2006 ntBASIC13.1□□□□□ -0.31
TMEM235A6NFC5 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 ADH5P3-201ENST00000433842 1137 ntBASIC13.1□□□□□ -0.31
TMEM235A6NFC5 SPDYE11-202ENST00000450699 704 ntBASIC13.1□□□□□ -0.31
TMEM235A6NFC5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 AL662844.1-201ENST00000546340 181 ntBASIC13.1□□□□□ -0.31
TMEM235A6NFC5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 LINC01225-203ENST00000563550 1244 ntBASIC13.1□□□□□ -0.31
TMEM235A6NFC5 SPDYE9P-201ENST00000570642 692 ntBASIC13.1□□□□□ -0.31
TMEM235A6NFC5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 SPDYE10P-202ENST00000612005 668 ntBASIC13.1□□□□□ -0.31
TMEM235A6NFC5 SPDYE8P-202ENST00000612377 668 ntBASIC13.1□□□□□ -0.31
TMEM235A6NFC5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 AC138969.3-201ENST00000546612 1459 ntBASIC13.1□□□□□ -0.31
TMEM235A6NFC5 AC138932.2-201ENST00000548268 1459 ntBASIC13.1□□□□□ -0.31
TMEM235A6NFC5 AC126755.4-201ENST00000549796 1459 ntBASIC13.1□□□□□ -0.31
TMEM235A6NFC5 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM235A6NFC5 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM235A6NFC5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms